Transcriptomics analysis of salt stress tolerance in the roots of the mangrove Avicennia officinalis

Halophytes: Potential Resources for Salt Stress Tolerance Genes and Promoters

(2017) Avinash Mishra et al.   Frontiers in Plant Science

Transcriptome Analysis of the Response to NaCl in Suaeda maritima Provides an Insight into Salt Tolerance Mechanisms in Halophytes

(2016) Sachin Ashruba Gharat et al.   PLoS One

Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing

(2015) Doori Park et al.   BMC GENOMICS

Isolation and Characterization of Six AP2/ERF Transcription Factor Genes in Chrysanthemum nankingense

(2015) Chunyan Gao et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptomics-based analysis using RNA-Seq of the coconut (Cocos nucifera) leaf in response to yellow decline phytoplasma infection

(2015) Naghmeh Nejat et al.   MOLECULAR GENETICS AND GENOMICS

Ethylene Response Factors: A Key Regulatory Hub in Hormone and Stress Signaling

(2015) Maren Müller et al.   PLANT PHYSIOLOGY

The Role of Ethylene in Plants Under Salinity Stress

(2015) Jian-Jun Tao et al.   Frontiers in Plant Science

NAC transcription factors in plant multiple abiotic stress responses: progress and prospects

(2015) Hongbo Shao et al.   Frontiers in Plant Science

Comprehensive analysis of differentially expressed genes and transcriptional regulation induced by salt stress in two contrasting cotton genotypes

(2014) Zhen Peng et al.   BMC GENOMICS

Identification of salt gland-associated genes and characterization of a dehydrin from the salt secretor mangrove Avicennia officinalis

(2014) Pavithra A Jyothi-Prakash et al.   BMC PLANT BIOLOGY

Trihelix transcription factor GT-4 mediates salt tolerance via interaction with TEM2 in Arabidopsis

(2014) Xiao-Hong Wang et al.   BMC PLANT BIOLOGY

Salt resistant crop plants

(2014) Stuart J Roy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Role of root hydrophobic barriers in salt exclusion of a mangrove plantAvicennia officinalis

(2014) PANNAGA KRISHNAMURTHY et al.   PLANT CELL AND ENVIRONMENT

Transcriptome Sequencing and Analysis of Leaf Tissue of Avicennia marina Using the Illumina Platform

(2014) Jianzi Huang et al.   PLoS One

Proteomic analysis of plasma membrane and tonoplast from the leaves of mangrove plantAvicennia officinalis

(2014) Pannaga Krishnamurthy et al.   PROTEOMICS

Role of ethylene signalling in the formation of constitutive aerenchyma in primary roots of rice

(2014) Kenta Yukiyoshi et al.   AoB Plants

Analysis of the barley leaf transcriptome under salinity stress using mRNA-Seq

(2013) Mark Ziemann et al.   ACTA PHYSIOLOGIAE PLANTARUM

Auxin and the integration of environmental signals into plant root development

(2013) Kemal Kazan   ANNALS OF BOTANY

Ethylene and reactive oxygen species are involved in root aerenchyma formation and adaptation of wheat seedlings to oxygen-deficient conditions

(2013) Takaki Yamauchi et al.   JOURNAL OF EXPERIMENTAL BOTANY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Intracellular NHX-Type Cation/H+ Antiporters in Plants

(2013) Maria Reguera et al.   Molecular Plant

Indole-3-butyric acid induces lateral root formation via peroxisome-derived indole-3-acetic acid and nitric oxide

(2013) Markus Schlicht et al.   NEW PHYTOLOGIST

GmFNSII-Controlled Soybean Flavone Metabolism Responds to Abiotic Stresses and Regulates Plant Salt Tolerance

(2013) Junhui Yan et al.   PLANT AND CELL PHYSIOLOGY

An Arabidopsis Soil-Salinity-Tolerance Mutation Confers Ethylene-Mediated Enhancement of Sodium/Potassium Homeostasis

(2013) C. Jiang et al.   PLANT CELL

A Spatio-Temporal Understanding of Growth Regulation during the Salt Stress Response in Arabidopsis

(2013) Y. Geng et al.   PLANT CELL

ERF115 Controls Root Quiescent Center Cell Division and Stem Cell Replenishment

(2013) J. Heyman et al.   SCIENCE

Designing a transcriptome next-generation sequencing project for a nonmodel plant species1

(2012) Susan R. Strickler et al.   AMERICAN JOURNAL OF BOTANY

Transcriptome Characterization and Sequencing-Based Identification of Salt-Responsive Genes in Millettia pinnata, a Semi-Mangrove Plant

(2012) J. Huang et al.   DNA RESEARCH

The salt-responsive transcriptome of Populus simonii×Populus nigra via DGE

(2012) Su Chen et al.   GENE

Arabidopsis Hexokinase-Like1 and Hexokinase1 Form a Critical Node in Mediating Plant Glucose and Ethylene Responses

(2012) A. Karve et al.   PLANT PHYSIOLOGY

Transcriptional Homeostasis of a Mangrove Species, Ceriops tagal, in Saline Environments, as Revealed by Microarray Analysis

(2012) Shan Liang et al.   PLoS One

Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes

(2012) Marc T. J. Johnson et al.   PLoS One

Auxin and ethylene: collaborators or competitors?

(2012) Gloria K. Muday et al.   TRENDS IN PLANT SCIENCE

Dual-Level Regulation of ACC Synthase Activity by MPK3/MPK6 Cascade and Its Downstream WRKY Transcription Factor during Ethylene Induction in Arabidopsis

(2012) Guojing Li et al.   PLoS Genetics

RNA-Seq Assembly – Are We There Yet?

(2012) Simon Schliesky et al.   Frontiers in Plant Science

The salt-responsive transcriptome of chickpea roots and nodules via deepSuperSAGE

(2011) Carlos Molina et al.   BMC PLANT BIOLOGY

Potassium channels in plant cells

(2011) Ingo Dreyer et al.   FEBS Journal

Transcriptome analysis reveals salt-stress-regulated biological processes and key pathways in roots of cotton (Gossypium hirsutum L.)

(2011) Dongxia Yao et al.   GENOMICS

Transcriptome sequencing of a highly salt tolerant mangrove species Sonneratia alba using Illumina platform

(2011) Sufang Chen et al.   Marine Genomics

Accumulation of trehalose increases soluble sugar contents in rice plants conferring tolerance to drought and salt stress

(2011) Mark C. F. R. Redillas et al.   Plant Biotechnology Reports

Coping with Stresses: Roles of Calcium- and Calcium/Calmodulin-Regulated Gene Expression

(2011) Anireddy S.N. Reddy et al.   PLANT CELL

Exploiting Nucleotide Composition to Engineer Promoters

(2011) Manfred G. Grabherr et al.   PLoS One

Massive parallel sequencing of mRNA in identification of unannotated salinity stress-inducible transcripts in rice (Oryza sativa L.)

(2010) Hiroshi Mizuno et al.   BMC GENOMICS

Comparative transcriptomics for mangrove species: an expanding resource

(2010) Maheshi Dassanayake et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Root-Specific Transcript Profiling of Contrasting Rice Genotypes in Response to Salinity Stress

(2010) Olivier Cotsaftis et al.   Molecular Plant

Overexpression of AtABCG36 improves drought and salt stress resistance in Arabidopsis

(2010) Do-Young Kim et al.   PHYSIOLOGIA PLANTARUM

A simple, rapid method to isolate salt glands for three-dimensional visualization, fluorescence imaging and cytological studies

(2010) Wee-Kee Tan et al.   Plant Methods

Salt tolerance mechanisms in mangroves: a review

(2010) Asish Kumar Parida et al.   TREES-STRUCTURE AND FUNCTION

Transcriptome Profiling of the Mangrove PlantBruguiera gymnorhizaand Identification of Salt Tolerance Genes byAgrobacteriumFunctional Screening

(2009) Takuya YAMANAKA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Mild salinity stimulates a stress-induced morphogenic response in Arabidopsis thaliana roots

(2009) G. Zolla et al.   JOURNAL OF EXPERIMENTAL BOTANY

Basic helix-loop-helix transcription factor from wild rice (OrbHLH2) improves tolerance to salt- and osmotic stress in Arabidopsis

(2009) Jing Zhou et al.   JOURNAL OF PLANT PHYSIOLOGY

Shedding light on an extremophile lifestyle through transcriptomics

(2009) M. Dassanayake et al.   NEW PHYTOLOGIST

Comparative Profiles of Gene Expression in Leaves and Roots of Maize Seedlings under Conditions of Salt Stress and the Removal of Salt Stress

(2009) Dong-Jin Qing et al.   PLANT AND CELL PHYSIOLOGY

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families

(2008) Gyorgy Szittya et al.   BMC GENOMICS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Salinity tolerance in halophytes*

(2008) Timothy J. Flowers et al.   NEW PHYTOLOGIST

Cell Identity Mediates the Response of Arabidopsis Roots to Abiotic Stress

(2008) J. R. Dinneny et al.   SCIENCE