Airway Microbial Diversity is Inversely Associated with Mite-Sensitized Rhinitis and Asthma in Early Childhood

Eosinophilic airway inflammation in asthmatic patients is associated with an altered airway microbiome

(2017) Asger Sverrild et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Airway Microbiota and the Implications of Dysbiosis in Asthma

(2016) Juliana Durack et al.   CURRENT ALLERGY AND ASTHMA REPORTS

Reduced airway microbiota diversity is associated with elevated allergic respiratory inflammation

(2015) Wenkai Yu et al.   ANNALS OF ALLERGY ASTHMA & IMMUNOLOGY

The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China

(2015) Lemian Liu et al.   ISME Journal

Microbial Community Composition and Diversity via 16S rRNA Gene Amplicons: Evaluating the Illumina Platform

(2015) Lucas Sinclair et al.   PLoS One

Application of a Neutral Community Model To Assess Structuring of the Human Lung Microbiome

(2015) Arvind Venkataraman et al.   mBio

Bacterioplankton community shifts associated with epipelagic and mesopelagic waters in the Southern Ocean

(2015) Zheng Yu et al.   Scientific Reports

Asthma in Preschool Children: A Review of the Diagnostic Challenges

(2014) A. J. Cave et al.   Journal of the American Board of Family Medicine

Expression of Genes Related to Anti-Inflammatory Pathways Are Modified Among Farmers’ Children

(2014) Remo Frei et al.   PLoS One

Analysis, Optimization and Verification of Illumina-Generated 16S rRNA Gene Amplicon Surveys

(2014) Michael C. Nelson et al.   PLoS One

Sensitization to Food and Inhalant Allergens in Relation to Atopic Diseases in Early Childhood: A Birth Cohort Study

(2014) Chih-Yung Chiu et al.   PLoS One

Microbial Communities in the Upper Respiratory Tract of Patients with Asthma and Chronic Obstructive Pulmonary Disease

(2014) HeeKuk Park et al.   PLoS One

Differential abundance analysis for microbial marker-gene surveys

(2013) Joseph N Paulson et al.   NATURE METHODS

The combined effects of family size and farm exposure on childhood hay fever and atopy

(2013) Jon Genuneit et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

Taxonomic Classification of Bacterial 16S rRNA Genes Using Short Sequencing Reads: Evaluation of Effective Study Designs

(2013) Orna Mizrahi-Man et al.   PLoS One

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

Does diversity of environmental microbial exposure matter for the occurrence of allergy and asthma?

(2012) Dick Heederik et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Different profiles of allergen sensitization in different ages and geographic areas in Changhua, Taiwan

(2012) Su-Boon Yong et al.   JOURNAL OF MICROBIOLOGY IMMUNOLOGY AND INFECTION

The human microbiome: at the interface of health and disease

(2012) Ilseung Cho et al.   NATURE REVIEWS GENETICS

Deep Sequencing Analyses of Low Density Microbial Communities: Working at the Boundary of Accurate Microbiota Detection

(2012) Giske Biesbroek et al.   PLoS One

Estimating the Richness of a Population When the Maximum Number of Classes Is Fixed: A Nonparametric Solution to an Archaeological Problem

(2012) Metin I. Eren et al.   PLoS One

Acute Otitis Media and Acute Bacterial Sinusitis

(2011) Ellen R. Wald   CLINICAL INFECTIOUS DISEASES

Childhood asthma and indoor allergen exposure and sensitization in Buffalo, New York

(2011) S. Lin et al.   INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH

Pathogen Recognition by the Innate Immune System

(2011) Himanshu Kumar et al.   INTERNATIONAL REVIEWS OF IMMUNOLOGY

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Multiple microbial exposures in the home may protect against asthma or allergy in childhood

(2010) J. E. Sordillo et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Th2-associated immunity to bacteria in teenagers and susceptibility to asthma

(2010) E. M. Hollams et al.   EUROPEAN RESPIRATORY JOURNAL

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Disordered Microbial Communities in Asthmatic Airways

(2010) Markus Hilty et al.   PLoS One

Comparative Analyses of the Bacterial Microbiota of the Human Nostril and Oropharynx

(2010) Katherine Lemon   mBio

A New Phylogenetic Diversity Measure Generalizing the Shannon Index and Its Application to Phyllostomid Bats

(2009) Benjamin Allen et al.   AMERICAN NATURALIST

The importance of the development of the intestinal microbiota in infancy

(2009) Carl Vael et al.   CURRENT OPINION IN PEDIATRICS