Lumican Peptides: Rational Design Targeting ALK5/TGFBRI

Extrinsic and Intrinsic Mechanisms by Which Mesenchymal Stem Cells Suppress the Immune System

(2016) Vivien J. Coulson-Thomas et al.   Ocular Surface

Docking and binding free energy calculations of sirtuin inhibitors

(2015) Berin Karaman et al.   EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY

Rapid, Precise, and Reproducible Prediction of Peptide–MHC Binding Affinities from Molecular Dynamics That Correlate Well with Experiment

(2015) Shunzhou Wan et al.   Journal of Chemical Theory and Computation

Self-Assembly and Collagen-Stimulating Activity of a Peptide Amphiphile Incorporating a Peptide Sequence from Lumican

(2015) Ian W. Hamley et al.   LANGMUIR

Peptides derived from CXCL8 based on in silico analysis inhibit CXCL8 interactions with its receptor CXCR1

(2015) Shinn-Jong Jiang et al.   Scientific Reports

GMXPBSA 2.0: A GROMACS tool to perform MM/PBSA and computational alanine scanning

(2014) C. Paissoni et al.   COMPUTER PHYSICS COMMUNICATIONS

Umbilical Cord Mesenchymal Stem Cells Suppress Host Rejection

(2014) Vivien Jane Coulson-Thomas et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Application of Docking and QM/MM-GBSA Rescoring to Screen for Novel Myt1 Kinase Inhibitors

(2014) Kanin Wichapong et al.   Journal of Chemical Information and Modeling

Improved PEP-FOLD Approach for Peptide and Miniprotein Structure Prediction

(2014) Yimin Shen et al.   Journal of Chemical Theory and Computation

Lumican as a Novel Marker for Differential Diagnosis of Bowen Disease and Actinic Keratosis

(2013) Ryoko Takayama et al.   AMERICAN JOURNAL OF DERMATOPATHOLOGY

Lumican expression, localization and antitumor activity in prostate cancer

(2013) Vivien J. Coulson-Thomas et al.   EXPERIMENTAL CELL RESEARCH

The regulatory roles of small leucine-rich proteoglycans in extracellular matrix assembly

(2013) Shoujun Chen et al.   FEBS Journal

A Unified Conformational Selection and Induced Fit Approach to Protein-Peptide Docking

(2013) Mikael Trellet et al.   PLoS One

Lumican Binds ALK5 to Promote Epithelium Wound Healing

(2013) Osamu Yamanaka et al.   PLoS One

Molecular modeling of hair keratin/peptide complex: Using MM-PBSA calculations to describe experimental binding results

(2012) Nuno G. Azoia et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

How Does a Drug Molecule Find Its Target Binding Site?

(2011) Yibing Shan et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Rosetta FlexPepDock web server—high resolution modeling of peptide–protein interactions

(2011) Nir London et al.   NUCLEIC ACIDS RESEARCH

Complete reconstruction of an enzyme-inhibitor binding process by molecular dynamics simulations

(2011) I. Buch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impaired skin wound healing in lumican-null mice

(2010) J-T. Yeh et al.   BRITISH JOURNAL OF DERMATOLOGY

Fibroblast and prostate tumor cell cross-talk: Fibroblast differentiation, TGF-β, and extracellular matrix down-regulation

(2010) Vivien J. Coulson-Thomas et al.   EXPERIMENTAL CELL RESEARCH

Inhibitory Peptides of the Sulfotransferase Domain of the Heparan Sulfate Enzyme,N-Deacetylase-N-sulfotransferase-1

(2010) Tarsis F. Gesteira et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Lumican is required for neutrophil extravasation following corneal injury and wound healing

(2010) Y. Hayashi et al.   JOURNAL OF CELL SCIENCE

Assessing the Performance of the MM/PBSA and MM/GBSA Methods. 1. The Accuracy of Binding Free Energy Calculations Based on Molecular Dynamics Simulations

(2010) Tingjun Hou et al.   Journal of Chemical Information and Modeling

Assessing the performance of the molecular mechanics/Poisson Boltzmann surface area and molecular mechanics/generalized Born surface area methods. II. The accuracy of ranking poses generated from docking

(2010) Tingjun Hou et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

The HADDOCK web server for data-driven biomolecular docking

(2010) Sjoerd J de Vries et al.   Nature Protocols

Lumican induces human corneal epithelial cell migration and integrin expression via ERK 1/2 signaling

(2008) Young Seomun et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Thiobarbiturates as Sirtuin Inhibitors: Virtual Screening, Free-Energy Calculations, and Biological Testing

(2008) Urszula Uciechowska et al.   ChemMedChem

Biological Functions of the Small Leucine-rich Proteoglycans: From Genetics to Signal Transduction

(2008) Liliana Schaefer et al.   JOURNAL OF BIOLOGICAL CHEMISTRY