Whole-genome sequencing of eight goat populations for the detection of selection signatures underlying production and adaptive traits

Genome-wide analysis reveals adaptation to high altitudes in Tibetan sheep

(2016) Caihong Wei et al.   Scientific Reports

Reference genome of wild goat (capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication

(2015) Yang Dong et al.   BMC GENOMICS

Putative PPAR Target Genes Express Highly in Skeletal Muscle of Insulin-Resistant MetS Model SHR/NDmc-cp Rats

(2015) Natsuyo HARIYA et al.   JOURNAL OF NUTRITIONAL SCIENCE AND VITAMINOLOGY

Genomic Analyses Reveal Potential Independent Adaptation to High Altitude in Tibetan Chickens

(2015) Ming-Shan Wang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

(2015) Badr Benjelloun et al.   Frontiers in Genetics

Cyclic expression of Lhx2 is involved in secondary hair follicle development in cashmere goat

(2014) Rongqing Geng et al.   GENE EXPRESSION PATTERNS

Whole-genome sequencing of six dog breeds from continuous altitudes reveals adaptation to high-altitude hypoxia

(2014) Xiao Gou et al.   GENOME RESEARCH

Expression of DGCR8-Dependent MicroRNAs Is Indispensable for Osteoclastic Development and Bone-Resorbing Activity

(2014) Toshifumi Sugatani et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Adaptations to Climate-Mediated Selective Pressures in Sheep

(2014) Feng-Hua Lv et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population Variation Revealed High-Altitude Adaptation of Tibetan Mastiffs

(2014) Yan Li et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic Signatures Reveal New Evidences for Selection of Important Traits in Domestic Cattle

(2014) Lingyang Xu et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative transcriptomic analysis to identify differentially expressed genes in fat tissue of adult Berkshire and Jeju Native Pig using RNA-seq

(2014) Simrinder Singh Sodhi et al.   MOLECULAR BIOLOGY REPORTS

Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle

(2014) Hans D Daetwyler et al.   NATURE GENETICS

Sequencing pools of individuals — mining genome-wide polymorphism data without big funding

(2014) Christian Schlötterer et al.   NATURE REVIEWS GENETICS

Design and Characterization of a 52K SNP Chip for Goats

(2014) Gwenola Tosser-Klopp et al.   PLoS One

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

(2014) M. Carneiro et al.   SCIENCE

Classic Selective Sweeps Revealed by Massive Sequencing in Cattle

(2014) Saber Qanbari et al.   PLoS Genetics

Identification of single nucleotide polymorphisms in the agouti signaling protein (ASIP) gene in some goat breeds in tropical and temperate climates

(2013) Mufliat A. Adefenwa et al.   MOLECULAR BIOLOGY REPORTS

The genomic signature of dog domestication reveals adaptation to a starch-rich diet

(2013) Erik Axelsson et al.   NATURE

Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars

(2013) Mingzhou Li et al.   NATURE GENETICS

Fgf9 from dermal γδ T cells induces hair follicle neogenesis after wounding

(2013) Denise Gay et al.   NATURE MEDICINE

Draft genome sequence of the Tibetan antelope

(2013) Ri-Li Ge et al.   Nature Communications

Genetic diversity and investigation of polledness in divergent goat populations using 52 088 SNPs

(2012) James W. Kijas et al.   ANIMAL GENETICS

Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus)

(2012) Yang Dong et al.   NATURE BIOTECHNOLOGY

Identification of QTL for UV-Protective Eye Area Pigmentation in Cattle by Progeny Phenotyping and Genome-Wide Association Analysis

(2012) Hubert Pausch et al.   PLoS One

Strong signatures of selection in the domestic pig genome

(2012) C.-J. Rubin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Regression-Based Approach to Selection Mapping

(2011) Pamela Wiener et al.   JOURNAL OF HEREDITY

Copy Number Variation and Missense Mutations of the Agouti Signaling Protein (ASIP) Gene in Goat Breeds with Different Coat Colors

(2010) L. Fontanesi et al.   CYTOGENETIC AND GENOME RESEARCH

HIF-1α signaling is augmented during intermittent hypoxia by induction of the Nrf2 pathway in NOX1-expressing adenocarcinoma A549 cells

(2010) Viktor Malec et al.   FREE RADICAL BIOLOGY AND MEDICINE

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Novel SNP of the goatprolactin gene (PRL) associated with cashmere traits

(2010) X. -Y. Lan et al.   JOURNAL OF APPLIED GENETICS

MiR-322/424 and -503 Are Induced during Muscle Differentiation and Promote Cell Cycle Quiescence and Differentiation by Down-Regulation of Cdc25A

(2010) Sukumar Sarkar et al.   MOLECULAR BIOLOGY OF THE CELL

Whole-genome resequencing reveals loci under selection during chicken domestication

(2010) Carl-Johan Rubin et al.   NATURE

Tracking footprints of artificial selection in the dog genome

(2010) J. M. Akey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Evidence for High-Altitude Adaptation in Tibet

(2010) T. S. Simonson et al.   SCIENCE

Cyclic Expression of Lhx2 Regulates Hair Formation

(2010) Gunilla Törnqvist et al.   PLoS Genetics

Missense and nonsense mutations in melanocortin 1 receptor (MC1R) gene of different goat breeds: association with red and black coat colour phenotypes but with unexpected evidences

(2009) Luca Fontanesi et al.   BMC GENETICS

Transcriptional alteration of p53 related processes as a key factor for skeletal muscle characteristics in Sus scrofa

(2009) Seung-Soo Kim et al.   MOLECULES AND CELLS

Genetic diversity and relationships of 10 Chinese goat breeds in the Middle and Western China

(2009) Yu Qi et al.   SMALL RUMINANT RESEARCH

Contrasting Mode of Evolution at a Coat Color Locus in Wild and Domestic Pigs

(2009) Meiying Fang et al.   PLoS Genetics

Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discovery

(2009) Sebastian H Eck et al.   GENOME BIOLOGY

Characterization of the porcine KIT ligand gene: expression analysis, genomic structure, polymorphism detection and association with coat colour traits

(2008) C. Hadjiconstantouras et al.   ANIMAL GENETICS

A gene duplication affecting expression of the ovine ASIP gene is responsible for white and black sheep

(2008) B. J. Norris et al.   GENOME RESEARCH

Neuronal pigmented autophagic vacuoles: lipofuscin, neuromelanin, and ceroid as macroautophagic responses during aging and disease

(2008) David Sulzer et al.   JOURNAL OF NEUROCHEMISTRY

A PstI polymorphism at 3′UTR of goat POU1F1 gene and its effect on cashmere production

(2008) X. Y. Lan et al.   MOLECULAR BIOLOGY REPORTS

The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

(2008) S. Naderi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA