Automatic Construction of Predictive Neuron Models through Large Scale Assimilation of Electrophysiological Data

Computational models in the age of large datasets

(2015) Timothy O’Leary et al.   CURRENT OPINION IN NEUROBIOLOGY

Systematic variational method for statistical nonlinear state and parameter estimation

(2015) Jingxin Ye et al.   PHYSICAL REVIEW E

Estimating parameters and predicting membrane voltages with conductance-based neuron models

(2014) C. Daniel Meliza et al.   BIOLOGICAL CYBERNETICS

Genomics analysis of potassium channel genes in songbirds reveals molecular specializations of brain circuits for the maintenance and production of learned vocalizations

(2013) Peter V Lovell et al.   BMC GENOMICS

Electrophysiological characterization and computational models of HVC neurons in the zebra finch

(2013) Arij Daou et al.   JOURNAL OF NEUROPHYSIOLOGY

Fast and accurate low-dimensional reduction of biophysically detailed neuron models

(2012) Addolorata Marasco et al.   Scientific Reports

A Self-Organizing State-Space-Model Approach for Parameter Estimation in Hodgkin-Huxley-Type Models of Single Neurons

(2012) Dimitrios V. Vavoulis et al.   PLoS Computational Biology

Dynamical estimation of neuron and network properties I: variational methods

(2011) Bryan A. Toth et al.   BIOLOGICAL CYBERNETICS

The use of automated parameter searches to improve ion channel kinetics for neural modeling

(2011) Eric B. Hendrickson et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Multiple models to capture the variability in biological neurons and networks

(2011) Eve Marder et al.   NATURE NEUROSCIENCE

Global parameter estimation of an Hodgkin–Huxley formalism using membrane voltage recordings: Application to neuro-mimetic analog integrated circuits

(2011) Laure Buhry et al.   NEUROCOMPUTING

Fast Algorithms for Bayesian Uncertainty Quantification in Large-Scale Linear Inverse Problems Based on Low-Rank Partial Hessian Approximations

(2011) H. P. Flath et al.   SIAM JOURNAL ON SCIENTIFIC COMPUTING

The genome of a songbird

(2010) Wesley C. Warren et al.   NATURE

Support for a synaptic chain model of neuronal sequence generation

(2010) Michael A. Long et al.   NATURE

Dynamical State and Parameter Estimation

(2009) Henry D. I. Abarbanel et al.   SIAM JOURNAL ON APPLIED DYNAMICAL SYSTEMS

Made-to-order spiking neuron model equipped with a multi-timescale adaptive threshold

(2009) Ryota Kobayashi   Frontiers in Computational Neuroscience

The quantitative single-neuron modeling competition

(2008) Renaud Jolivet et al.   BIOLOGICAL CYBERNETICS

Automated neuron model optimization techniques: a review

(2008) W. Van Geit et al.   BIOLOGICAL CYBERNETICS

Minimal Hodgkin–Huxley type models for different classes of cortical and thalamic neurons

(2008) Martin Pospischil et al.   BIOLOGICAL CYBERNETICS

Birdsong “Transcriptomics”: Neurochemical Specializations of the Oscine Song System

(2008) Peter V. Lovell et al.   PLoS One