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Title
Antimicrobial Resistance Prediction in PATRIC and RAST
Authors
Keywords
-
Journal
Scientific Reports
Volume 6, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-06-14
DOI
10.1038/srep27930
References
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- (2015) Maxwell W. Libbrecht et al. NATURE REVIEWS GENETICS
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- Kraken: ultrafast metagenomic sequence classification using exact alignments
- (2014) Derrick E Wood et al. GENOME BIOLOGY
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- (2014) J. S. Gerber et al. Journal of the Pediatric Infectious Diseases Society
- Variability in Antibiotic Prescribing: An Inconvenient Truth
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