The chemosensory receptors of codling moth Cydia pomonella–expression in larvae and adults

A reference gene set for chemosensory receptor genes of Manduca sexta

(2015) Christopher Koenig et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Molecular basis for odorant receptor tuning: a short C-terminal sequence is necessary and sufficient for selectivity of mosquito Or8

(2015) S. R. Hill et al.   INSECT MOLECULAR BIOLOGY

The Peripheral Olfactory Repertoire of the Lightbrown Apple Moth, Epiphyas postvittana

(2015) Jacob A. Corcoran et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Pheromone Receptor Evolution in the Cryptic Leafroller Species, Ctenopseustis obliquana and C. herana

(2014) Bernd Steinwender et al.   JOURNAL OF MOLECULAR EVOLUTION

Peripheral Coding of Taste

(2014) Emily R. Liman et al.   NEURON

Peripheral olfactory signaling in insects

(2014) Eunho Suh et al.   Current Opinion in Insect Science

An odorant receptor from the common cutworm (Spodoptera litura) exclusively tuned to the important plant volatile cis-3-Hexenyl acetate

(2013) J. Zhang et al.   INSECT MOLECULAR BIOLOGY

Function and central projections of gustatory receptor neurons on the antenna of the noctuid moth Spodoptera littoralis

(2013) Alexandra Popescu et al.   JOURNAL OF COMPARATIVE PHYSIOLOGY A-NEUROETHOLOGY SENSORY NEURAL AND BEHAVIORAL PHYSIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Differential Expression Patterns in Chemosensory and Non-Chemosensory Tissues of Putative Chemosensory Genes Identified by Transcriptome Analysis of Insect Pest the Purple Stem Borer Sesamia inferens (Walker)

(2013) Ya-Nan Zhang et al.   PLoS One

Neural coding merges sex and habitat chemosensory signals in an insect herbivore

(2013) F. Trona et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Female Behaviour Drives Expression and Evolution of Gustatory Receptors in Butterflies

(2013) Adriana D. Briscoe et al.   PLoS Genetics

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Behavior of Codling Moth (Lepidoptera: Tortricidae) Neonate Larvae on Surfaces Treated With Microencapsulated Pear Ester

(2012) Douglas M. Light et al.   ENVIRONMENTAL ENTOMOLOGY

ExPASy: SIB bioinformatics resource portal

(2012) P. Artimo et al.   NUCLEIC ACIDS RESEARCH

Putative Chemosensory Receptors of the Codling Moth, Cydia pomonella, Identified by Antennal Transcriptome Analysis

(2012) Jonas M. Bengtsson et al.   PLoS One

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

The Monarch Butterfly Genome Yields Insights into Long-Distance Migration

(2011) Shuai Zhan et al.   CELL

Identification and initial characterization of the 3′ end of gene transcripts encoding putative members of the pheromone receptor subfamily in Lepidoptera

(2011) Stephen F. Garczynski et al.   Insect Science

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Evolution of Insect Olfaction

(2011) Bill S. Hansson et al.   NEURON

The Molecular and Cellular Basis of Bitter Taste in Drosophila

(2011) Linnea A. Weiss et al.   NEURON

Functional Architecture of Olfactory Ionotropic Glutamate Receptors

(2011) Liliane Abuin et al.   NEURON

Perception of plant volatile blends by herbivorous insects – Finding the right mix

(2011) Toby J.A. Bruce et al.   PHYTOCHEMISTRY

Large Scale Library Generation for High Throughput Sequencing

(2011) Erik Borgström et al.   PLoS One

Sugar-regulated cation channel formed by an insect gustatory receptor

(2011) K. Sato et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Parallelization of the MAFFT multiple sequence alignment program

(2010) Kazutaka Katoh et al.   BIOINFORMATICS

Coding and interaction of sex pheromone and plant volatile signals in the antennal lobe of the codling moth Cydia pomonella

(2010) F. Trona et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Increased Throughput by Parallelization of Library Preparation for Massive Sequencing

(2010) Sverker Lundin et al.   PLoS One

Ancient Protostome Origin of Chemosensory Ionotropic Glutamate Receptors and the Evolution of Insect Taste and Olfaction

(2010) Vincent Croset et al.   PLoS Genetics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Variant Ionotropic Glutamate Receptors as Chemosensory Receptors in Drosophila

(2009) Richard Benton et al.   CELL

Highly Selective Tuning of a Silkworm Olfactory Receptor to a Key Mulberry Leaf Volatile

(2009) Kana Tanaka et al.   CURRENT BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Molecular basis of female-specific odorant responses in Bombyx mori

(2008) Alisha R. Anderson et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

The gustatory receptor family in the silkworm mothBombyx moriis characterized by a large expansion of a single lineage of putative bitter receptors

(2008) K. W. Wanner et al.   INSECT MOLECULAR BIOLOGY

Codling Moth Management and Chemical Ecology

(2007) Peter Witzgall et al.   Annual Review of Entomology