Insights into mutualism mechanism and versatile metabolism of Ketogulonicigenium vulgare Hbe602 based on comparative genomics and metabolomics studies

Genome Sequence of Bacillus endophyticus and Analysis of Its Companion Mechanism in the Ketogulonigenium vulgare-Bacillus Strain Consortium

(2015) Nan Jia et al.   PLoS One

Stepwise metabolic engineering of Gluconobacter oxydans WSH-003 for the direct production of 2-keto-l-gulonic acid from d-sorbitol

(2014) Lili Gao et al.   METABOLIC ENGINEERING

Comparative Proteomic Analysis of Experimental Evolution of the Bacillus cereus-Ketogulonicigenium vulgare Co-Culture

(2014) Qian Ma et al.   PLoS One

Metabolomic Analysis of Cooperative Adaptation between Co-Cultured Bacillus cereus and Ketogulonicigenium vulgare

(2014) Ming-Zhu Ding et al.   PLoS One

Development of a minimal chemically defined medium for Ketogulonicigenium vulgare WSH001 based on its genome-scale metabolic model

(2013) Shicun Fan et al.   JOURNAL OF BIOTECHNOLOGY

Combinational expression of sorbose/sorbosone dehydrogenases and cofactor pyrroloquinoline quinone increases 2-keto-l-gulonic acid production in Ketogulonigenium vulgare–Bacillus cereus consortium

(2013) Jin Du et al.   METABOLIC ENGINEERING

Regulatory systems controlling motility and gene transfer agent production and release in Rhodobacter capsulatus

(2012) Ryan G. Mercer et al.   FEMS MICROBIOLOGY LETTERS

DoriC 5.0: an updated database of oriC regions in both bacterial and archaeal genomes

(2012) Feng Gao et al.   NUCLEIC ACIDS RESEARCH

Metabolomic Analysis of the Positive Effects on Ketogulonigenium vulgare Growth and 2-Keto-L-Gulonic Acid Production by Reduced Glutathione

(2012) Jian Zhou et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Proteomic Analysis of Ketogulonicigenium vulgare under Glutathione Reveals High Demand for Thiamin Transport and Antioxidant Protection

(2012) Qian Ma et al.   PLoS One

Adaptive seeds tame genomic sequence comparison

(2011) S. M. Kielbasa et al.   GENOME RESEARCH

Gelatin enhances 2-keto-l-gulonic acid production based on Ketogulonigenium vulgare genome annotation

(2011) Liming Liu et al.   JOURNAL OF BIOTECHNOLOGY

Genetic engineering of Ketogulonigenium vulgare for enhanced production of 2-keto-l-gulonic acid

(2011) Lei Cai et al.   JOURNAL OF BIOTECHNOLOGY

Comparative metabolic profiling of parental and inhibitors-tolerant yeasts during lignocellulosic ethanol fermentation

(2011) Ming-Zhu Ding et al.   Metabolomics

Metabolomic profiling elucidates community dynamics of the Ketogulonicigenium vulgare–Bacillus megaterium consortium

(2011) Jin Du et al.   Metabolomics

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Integrated Proteomic and Metabolomic Analysis of an Artificial Microbial Community for Two-Step Production of Vitamin C

(2011) Qian Ma et al.   PLoS One

Complete Genome Sequence of the Bacterium Ketogulonicigenium vulgare Y25

(2010) X.-h. Xiong et al.   JOURNAL OF BACTERIOLOGY

Continuous 2-Keto-l-gulonic acid fermentation by mixed culture of Ketogulonicigenium vulgare DSM 4025 and Bacillus megaterium or Xanthomonas maltophilia

(2009) Yoshinori Takagi et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metabolome profiling reveals adaptive evolution of Saccharomyces cerevisiae during repeated vacuum fermentations

(2009) Ming-Zhu Ding et al.   Metabolomics

LuxR-family 'solos': bachelor sensors/regulators of signalling molecules

(2009) S. Subramoni et al.   MICROBIOLOGY-SGM

CVTree update: a newly designed phylogenetic study platform using composition vectors and whole genomes

(2009) Z. Xu et al.   NUCLEIC ACIDS RESEARCH

Ori-Finder: A web-based system for finding oriCs in unannotated bacterial genomes

(2008) Feng Gao et al.   BMC BIOINFORMATICS

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

AHL-driven quorum-sensing circuits: their frequency and function among the Proteobacteria

(2008) Rebecca J Case et al.   ISME Journal

The CGView Server: a comparative genomics tool for circular genomes

(2008) J. R. Grant et al.   NUCLEIC ACIDS RESEARCH