A novel combined RNA-protein interaction analysis distinguishes HIV-1 Gag protein binding sites from structural change in the viral RNA leader

Analysis of protein–RNA interactions in CRISPR proteins and effector complexes by UV-induced cross-linking and mass spectrometry

(2015) Kundan Sharma et al.   METHODS

In virio SHAPE analysis of tRNALys3 annealing to HIV-1 genomic RNA in wild type and protease-deficient virus

(2015) Elias Seif et al.   Retrovirology

Current perspectives on RNA secondary structure probing

(2014) Julia Kenyon et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Themes and variations in riboswitch structure and function

(2014) Alla Peselis et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Global Changes in the RNA Binding Specificity of HIV-1 Gag Regulate Virion Genesis

(2014) Sebla B. Kutluay et al.   CELL

Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins

(2014) Katharina Kramer et al.   NATURE METHODS

Life of psi: How full-length HIV-1 RNAs become packaged genomes in the viral particles

(2014) Malika Kuzembayeva et al.   VIROLOGY

Specific recognition of the HIV-1 genomic RNA by the Gag precursor

(2014) Ekram W. Abd El-Wahab et al.   Nature Communications

In-gel probing of individual RNA conformers within a mixed population reveals a dimerization structural switch in the HIV-1 leader

(2013) Julia C. Kenyon et al.   NUCLEIC ACIDS RESEARCH

Three-Dimensional RNA Structure of the Major HIV-1 Packaging Signal Region

(2013) James D. Stephenson et al.   STRUCTURE

Dimeric RNA Recognition Regulates HIV-1 Genome Packaging

(2013) Olga A. Nikolaitchik et al.   PLoS Pathogens

Comparative Structural Effects of HIV-1 Gag and Nucleocapsid Proteins in Binding to and Unwinding of the Viral RNA Packaging Signal

(2012) Neil M. Bell et al.   BIOCHEMISTRY

Structural Determinants and Mechanism of HIV-1 Genome Packaging

(2011) Kun Lu et al.   JOURNAL OF MOLECULAR BIOLOGY

NMR Detection of Structures in the HIV-1 5'-Leader RNA That Regulate Genome Packaging

(2011) K. Lu et al.   SCIENCE

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

(2010) Julian König et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Imaging the biogenesis of individual HIV-1 virions in live cells

(2008) Nolwenn Jouvenet et al.   NATURE

ShapeFinder: A software system for high-throughput quantitative analysis of nucleic acid reactivity information resolved by capillary electrophoresis

(2008) S. M. Vasa et al.   RNA

High-Throughput SHAPE Analysis Reveals Structures in HIV-1 Genomic RNA Strongly Conserved across Distinct Biological States

(2008) Kevin A Wilkinson et al.   PLOS BIOLOGY