Illumina high-throughput sequencing and comparative analysis of bacterial communities in cherry orchard soil

Inoculation with Metal-Mobilizing Plant-Growth-Promoting RhizobacteriumBacillussp. SC2b and Its Role in Rhizoremediation

(2015) Ying Ma et al.   JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART A-CURRENT ISSUES

Effect of long-term different fertilization on bacterial community structures and diversity in citrus orchard soil of volcanic ash

(2014) Jae Ho Joa et al.   JOURNAL OF MICROBIOLOGY

Mercury-Resistant Bacteria From Salt Marsh of Tagus Estuary: The Influence of Plants Presence and Mercury Contamination Levels

(2014) Neusa L. L. Figueiredo et al.   JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART A-CURRENT ISSUES

Different Continuous Cropping Spans Significantly Affect Microbial Community Membership and Structure in a Vanilla-Grown Soil as Revealed by Deep Pyrosequencing

(2014) Wu Xiong et al.   MICROBIAL ECOLOGY

Microbial Community Diversities and Taxa Abundances in Soils along a Seven-Year Gradient of Potato Monoculture Using High Throughput Pyrosequencing Approach

(2014) Xing Liu et al.   PLoS One

Degradation of benzene, toluene, and xylene isomers by a bacterial consortium obtained from rhizosphere soil of Cyperus sp. grown in a petroleum-contaminated area

(2013) Diana Katherine Ortega-González et al.   FOLIA MICROBIOLOGICA

Effects of environmental variation and spatial distance on Bacteria, Archaea and viruses in sub-polar and arctic waters

(2013) Christian Winter et al.   ISME Journal

Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River

(2013) C. Staley et al.   JOURNAL OF APPLIED MICROBIOLOGY

Rhodanobacter umsongensis sp. nov., isolated from a Korean ginseng field

(2013) Yi-Seul Kim et al.   JOURNAL OF MICROBIOLOGY

Aerobic uranium immobilization by Rhodanobacter A2-61 through formation of intracellular uranium–phosphate complexes

(2013) Tânia Sousa et al.   Metallomics

Variation of rhizosphere bacterial community in watermelon continuous mono-cropping soil by long-term application of a novel bioorganic fertilizer

(2013) Ning Ling et al.   MICROBIOLOGICAL RESEARCH

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Shifts in soil bacterial community after eight years of land-use change

(2013) Afnan Khalil Ahmad Suleiman et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Genome Sequences for Six Rhodanobacter Strains, Isolated from Soils and the Terrestrial Subsurface, with Variable Denitrification Capabilities

(2012) J. E. Kostka et al.   JOURNAL OF BACTERIOLOGY

Distinctive Bacterial Communities in the Rhizoplane of Four Tropical Tree Species

(2012) Yoon Myung Oh et al.   MICROBIAL ECOLOGY

The generation and maintenance of diversity in microbial communities

(2011) Noah Fierer et al.   AMERICAN JOURNAL OF BOTANY

Characterization of a novel ginsenoside-hydrolyzing α-l-arabinofuranosidase, AbfA, from Rhodanobacter ginsenosidimutans Gsoil 3054T

(2011) Dong-Shan An et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The phylogenetic distribution and ecological role of carbon monoxide oxidation in the genus Burkholderia

(2011) Carolyn F. Weber et al.   FEMS MICROBIOLOGY ECOLOGY

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Comparative Analysis of Bacterial Communities in a Potato Field as Determined by Pyrosequencing

(2011) Özgül İnceoğlu et al.   PLoS One

Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada

(2011) Beth F.T. Brockett et al.   SOIL BIOLOGY & BIOCHEMISTRY

Local and regional factors influencing bacterial community assembly

(2011) Eva S. Lindström et al.   Environmental Microbiology Reports

Environmental distribution of prokaryotic taxa

(2010) Javier Tamames et al.   BMC MICROBIOLOGY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

BIPES, a cost-effective high-throughput method for assessing microbial diversity

(2010) Hong-Wei Zhou et al.   ISME Journal

Dormancy contributes to the maintenance of microbial diversity

(2010) S. E. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mixotrophic metabolism in Burkholderia kururiensis subsp. thiooxydans subsp. nov., a facultative chemolithoautotrophic thiosulfate oxidizing bacterium isolated from rhizosphere soil and proposal for classification of the type strain of Burkholderia kururiensis as Burkholderia kururiensis subsp. kururiensis subsp. nov.

(2009) Rangasamy Anandham et al.   ARCHIVES OF MICROBIOLOGY

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial diversity in cucumber (Cucumis sativus) rhizosphere in response to salinity, soil pH, and boron

(2009) A.M. Ibekwe et al.   SOIL BIOLOGY & BIOCHEMISTRY

Rapid identification of nitrogen-fixing and legume-nodulating Burkholderia species based on PCR 16S rRNA species-specific oligonucleotides

(2009) Arnoldo Wong-Villarreal et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

(2008) Micah Hamady et al.   NATURE METHODS

The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

(2008) Les Dethlefsen et al.   PLOS BIOLOGY

Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

(2008) Susan M. Huse et al.   PLoS Genetics