Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort

Use of Gene Ontology Annotation to understand the peroxisome proteome in humans

(2013) Prudence Mutowo-Meullenet et al.   Database-The Journal of Biological Databases and Curation

Improved Gene Ontology Annotation for Biofilm Formation, Filamentous Growth, and Phenotypic Switching in Candida albicans

(2012) Diane O. Inglis et al.   EUKARYOTIC CELL

An expansive human regulatory lexicon encoded in transcription factor footprints

(2012) Shane Neph et al.   NATURE

Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans

(2012) Karen Adelman et al.   NATURE REVIEWS GENETICS

Gene Ontology Annotations and Resources

(2012)   NUCLEIC ACIDS RESEARCH

The Transcription Factor Encyclopedia

(2012) Dimas Yusuf et al.   GENOME BIOLOGY

How the gene ontology evolves

(2011) Sabina Leonelli et al.   BMC BIOINFORMATICS

The IntAct molecular interaction database in 2012

(2011) S. Kerrien et al.   NUCLEIC ACIDS RESEARCH

A theory of biological relativity: no privileged level of causation

(2011) D. Noble   Interface Focus

c-Myc Regulates Transcriptional Pause Release

(2010) Peter B. Rahl et al.   CELL

Inducible gene expression: diverse regulatory mechanisms

(2010) Vikki M. Weake et al.   NATURE REVIEWS GENETICS

Deconstructing repression: evolving models of co-repressor action

(2010) Valentina Perissi et al.   NATURE REVIEWS GENETICS

Entrez Gene: gene-centered information at NCBI

(2010) D. Maglott et al.   NUCLEIC ACIDS RESEARCH

A census of human transcription factors: function, expression and evolution

(2009) Juan M. Vaquerizas et al.   NATURE REVIEWS GENETICS

Using Network Component Analysis to Dissect Regulatory Networks Mediated by Transcription Factors in Yeast

(2009) Chun Ye et al.   PLoS Computational Biology

TFCat: the curated catalog of mouse and human transcription factors

(2009) Debra L Fulton et al.   GENOME BIOLOGY