Sequence analysis on the information of folding initiation segments in ferredoxin-like fold proteins

Funneling and frustration in the energy landscapes of some designed and simplified proteins

(2013) Ha H. Truong et al.   JOURNAL OF CHEMICAL PHYSICS

Clusters of Branched Aliphatic Side Chains Serve As Cores of Stability in the Native State of the HisF TIM Barrel Protein

(2013) Basavanapura N. Gangadhara et al.   JOURNAL OF MOLECULAR BIOLOGY

Positively Selected Sites in Cetacean Myoglobins Contribute to Protein Stability

(2013) Pouria Dasmeh et al.   PLoS Computational Biology

Analyses of Protein Sequences Using Inter-Residue Average Distance Statistics to Study Folding Processes and the Significance of Their Partial Sequences

(2012) Yosuke Kawai et al.   PROTEIN AND PEPTIDE LETTERS

The Protein-Folding Problem, 50 Years On

(2012) K. A. Dill et al.   SCIENCE

Relationship between protein folding kinetics and amino acid properties

(2011) Jitao T. Huang et al.   AMINO ACIDS

Protein Structural Modularity and Robustness Are Associated with Evolvability

(2011) Mary M. Rorick et al.   Genome Biology and Evolution

Mechanical Unfolding of Acylphosphatase Studied by Single-Molecule Force Spectroscopy and MD Simulations

(2010) Gali Arad-Haase et al.   BIOPHYSICAL JOURNAL

Topological Frustration in βα-Repeat Proteins: Sequence Diversity Modulates the Conserved Folding Mechanisms of α/β/α Sandwich Proteins

(2010) Ronald D. Hills et al.   JOURNAL OF MOLECULAR BIOLOGY

Different Folding Pathways Taken by Highly Homologous Proteins, Goat α-Lactalbumin and Canine Milk Lysozyme

(2010) Takashi Nakamura et al.   JOURNAL OF MOLECULAR BIOLOGY

Global and local prediction of protein folding rates based on sequence autocorrelation information

(2010) Lili Xi et al.   JOURNAL OF THEORETICAL BIOLOGY

What lessons can be learned from studying the folding of homologous proteins?

(2010) Adrian A. Nickson et al.   METHODS

The nucleation mechanism of protein folding: a survey of computer simulation studies

(2009) Patrícia F N Faísca   JOURNAL OF PHYSICS-CONDENSED MATTER

Analysis of 3D structural differences in the IgG-binding domains based on the interresidue average-distance statistics

(2008) Takeshi Kikuchi   AMINO ACIDS

Coevolution of Function and the Folding Landscape: Correlation with Density of Native Contacts

(2008) Ronald D. Hills et al.   BIOPHYSICAL JOURNAL

Changes of Protein Folding Pathways by Circular Permutation

(2008) Ellinor Haglund et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identifying critical residues in protein folding: Insights from φ-value and P[sub fold] analysis

(2008) P. F. N. Faísca et al.   JOURNAL OF CHEMICAL PHYSICS

The Folding Process of Acylphosphatase from Escherichia coli is Remarkably Accelerated by the Presence of a Disulfide Bond

(2008) Claudia Parrini et al.   JOURNAL OF MOLECULAR BIOLOGY

Subdomain Competition, Cooperativity, and Topological Frustration in the Folding of CheY

(2008) Ronald D. Hills et al.   JOURNAL OF MOLECULAR BIOLOGY

Comparison of successive transition states for folding reveals alternative early folding pathways of two homologous proteins

(2008) N. Calosci et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA