Genotype-Phenotype Associations in a Nonmodel Prokaryote

PGAT: a multistrain analysis resource for microbial genomes

(2011) M. J. Brittnacher et al.   BIOINFORMATICS

Identifying microbial fitness determinants by insertion sequencing using genome-wide transposon mutant libraries

(2011) Andrew L Goodman et al.   Nature Protocols

Genome-Scale Identification of Resistance Functions in Pseudomonas aeruginosa Using Tn-seq

(2011) L. A. Gallagher et al.   mBio

Evidence-Based Annotation of Gene Function in Shewanella oneidensis MR-1 Using Genome-Wide Fitness Profiling across 121 Conditions

(2011) Adam Deutschbauer et al.   PLoS Genetics

Phenotypic Landscape of a Bacterial Cell

(2010) Robert J. Nichols et al.   CELL

Molecular complexity orchestrates modulation of phagosome biogenesis and escape to the cytosol of macrophages by Francisella tularensis

(2010) Rexford Asare et al.   ENVIRONMENTAL MICROBIOLOGY

Mutations of Francisella novicida that Alter the Mechanism of Its Phagocytosis by Murine Macrophages

(2010) Xin-He Lai et al.   PLoS One

From complete genome sequence to ‘complete’ understanding?

(2010) Michael Y. Galperin et al.   TRENDS IN BIOTECHNOLOGY

Global Genotype-Phenotype Correlations in Pseudomonas aeruginosa

(2010) Claudia Pommerenke et al.   PLoS Pathogens

Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants

(2009) G. C. Langridge et al.   GENOME RESEARCH

Biochemical networks: The evolution of gene annotation

(2009) Simon Kasif et al.   Nature Chemical Biology

Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms

(2009) Tim van Opijnen et al.   NATURE METHODS

Genetic Architecture of Intrinsic Antibiotic Susceptibility

(2009) Hany S. Girgis et al.   PLoS One

An ABC transport system that maintains lipid asymmetry in the Gram-negative outer membrane

(2009) J. C. Malinverni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Targeting a bacterial stress response to enhance antibiotic action

(2009) S. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung

(2009) J. D. Gawronski et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of Antibiotics and a Proto-Oncogene Homolog on Destruction of Protein Translocator SecY

(2009) J. van Stelten et al.   SCIENCE

The AcrAB RND efflux system from the live vaccine strain ofFrancisella tularensisis a multiple drug efflux system that is required for virulence in mice

(2008) Xiaowen R. Bina et al.   FEMS MICROBIOLOGY LETTERS

Genome-Wide Screen in Francisella novicida for Genes Required for Pulmonary and Systemic Infection in Mice

(2008) P. S. Kraemer et al.   INFECTION AND IMMUNITY

Determination of Antibiotic Hypersensitivity among 4,000 Single-Gene-Knockout Mutants of Escherichia coli

(2008) C. Tamae et al.   JOURNAL OF BACTERIOLOGY

Genome and proteome annotation: organization, interpretation and integration

(2008) G. A Reeves et al.   Journal of the Royal Society Interface

The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes

(2008) M. E. Hillenmeyer et al.   SCIENCE

Genetic elements for selection, deletion mutagenesis and complementation inFrancisellaspp.

(2007) Jagjit S. Ludu et al.   FEMS MICROBIOLOGY LETTERS