Potato Spindle Tuber Viroid RNA-Templated Transcription: Factors and Regulation

ICTV Virus Taxonomy Profile: Avsunviroidae

(2018) Francesco Di Serio et al.   JOURNAL OF GENERAL VIROLOGY

Born to run: control of transcription elongation by RNA polymerase II

(2018) Fei Xavier Chen et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The exon–intron gene structure upstream of the initiation codon predicts translation efficiency

(2018) Chun Shen Lim et al.   NUCLEIC ACIDS RESEARCH

Transcripts from downstream alternative transcription start sites evade uORF-mediated inhibition of gene expression inArabidopsis

(2018) Yukio Kurihara et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA 3-dimensional structural motifs as a critical constraint of viroid RNA evolution

(2018) Ying Wang et al.   PLoS Pathogens

Potato Spindle Tuber Viroid Modulates Its Replication through a Direct Interaction with a Splicing Regulator

(2018) Jian Jiang et al.   JOURNAL OF VIROLOGY

Genome editing of upstream open reading frames enables translational control in plants

(2018) Huawei Zhang et al.   NATURE BIOTECHNOLOGY

uORF-mediated translation allows engineered plant disease resistance without fitness costs

(2017) Guoyong Xu et al.   NATURE

A uORF Represses the Transcription Factor AtHB1 in Aerial Tissues to Avoid a Deleterious Phenotype

(2017) Pamela A. Ribone et al.   PLANT PHYSIOLOGY

A Land Plant-Specific Transcription Factor Directly Enhances Transcription of a Pathogenic Noncoding RNA Template by DNA-Dependent RNA Polymerase II

(2016) Ying Wang et al.   PLANT CELL

Dissecting the secondary structure of the circular RNA of a nuclear viroid in vivo: A “naked” rod-like conformation similar but not identical to that observed in vitro

(2016) Amparo López-Carrasco et al.   RNA Biology

Viroids: Survivors from the RNA World?

(2014) Ricardo Flores et al.   Annual Review of Microbiology

Nonsense-Mediated Decay Serves as a General Viral Restriction Mechanism in Plants

(2014) Damien Garcia et al.   Cell Host & Microbe

Comprehensive Secondary Structure Elucidation of Four Genera of the Family Pospiviroidae

(2014) Tamara Giguère et al.   PLoS One

A Bromodomain-Containing Host Protein Mediates the Nuclear Importation of a Satellite RNA of Cucumber Mosaic Virus

(2013) S. Chaturvedi et al.   JOURNAL OF VIROLOGY

Structure, function and regulation of Transcription Factor IIIA: From Xenopus to Arabidopsis

(2012) Elodie Layat et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Tomato RNA polymerase II interacts with the rod-like conformation of the left terminal domain of the potato spindle tuber viroid positive RNA genome

(2012) T. Bojic et al.   JOURNAL OF GENERAL VIROLOGY

Transcript levels, alternative splicing and proteolytic cleavage of TFIIIA control 5S rRNA accumulation during Arabidopsis thaliana development

(2012) Elodie Layat et al.   PLANT JOURNAL

Ribosomal protein L5 and transcription factor IIIA from Arabidopsis thaliana bind in vitro specifically Potato spindle tuber viroid RNA

(2010) Marcelo Eiras et al.   ARCHIVES OF VIROLOGY

Viroids: Small Probes for Exploring the Vast Universe of RNA Trafficking in Plants

(2010) Ying Wang et al.   Journal of Integrative Plant Biology

The Biology of Viroid-Host Interactions

(2009) Biao Ding   Annual Review of Phytopathology

Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA

(2009) Y. Fu et al.   GENOME RESEARCH

A plant 5S ribosomal RNA mimic regulates alternative splicing of transcription factor IIIA pre-mRNAs

(2009) Ming C Hammond et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Formation of an RNA polymerase II preinitiation complex on an RNA promoter derived from the hepatitis delta virus RNA genome

(2008) A. Abrahem et al.   NUCLEIC ACIDS RESEARCH

A Genomic Map of Viroid RNA Motifs Critical for Replication and Systemic Trafficking

(2008) X. Zhong et al.   PLANT CELL