Cell wall composition and digestibility alterations in Brachypodium distachyon achieved through reduced expression of the UDP-arabinopyranose mutase

Powerful regulatory systems and post-transcriptional gene silencing resist increases in cellulose content in cell walls of barley

(2015) Hwei-Ting Tan et al.   BMC PLANT BIOLOGY

Quantitative HPLC-MS analysis of nucleotide sugars in plant cells following off-line SPE sample preparation

(2014) Robert Behmüller et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Brachypodium: a promising hub between model species and cereals

(2014) Thomas Girin et al.   JOURNAL OF EXPERIMENTAL BOTANY

Systems and synthetic biology approaches to alter plant cell walls and reduce biomass recalcitrance

(2014) Udaya C. Kalluri et al.   PLANT BIOTECHNOLOGY JOURNAL

Identification and suppression of thep-coumaroyl CoA:hydroxycinnamyl alcohol transferase inZea maysL.

(2014) Jane M. Marita et al.   PLANT JOURNAL

The Golgi localized bifunctional UDP-rhamnose/UDP-galactose transporter family of Arabidopsis

(2014) C. Rautengarten et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analysis of plant nucleotide sugars by hydrophilic interaction liquid chromatography and tandem mass spectrometry

(2013) Jun Ito et al.   ANALYTICAL BIOCHEMISTRY

Evolving Views of Pectin Biosynthesis

(2013) Melani A. Atmodjo et al.   Annual Review of Plant Biology

Are designer plant cell walls a realistic aspiration or will the plasticity of the plant's metabolism win out?

(2013) Monika S Doblin et al.   CURRENT OPINION IN BIOTECHNOLOGY

Regulation of secondary wall synthesis and cell death by NAC transcription factors in the monocot Brachypodium distachyon

(2013) Elene R. Valdivia et al.   JOURNAL OF EXPERIMENTAL BOTANY

Dynamic metabolic flux analysis of plant cell wall synthesis

(2013) Xuewen Chen et al.   METABOLIC ENGINEERING

p-Coumaroyl-CoA:monolignol transferase (PMT) acts specifically in the lignin biosynthetic pathway inBrachypodium distachyon

(2013) Deborah L. Petrik et al.   PLANT JOURNAL

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

Inactivation of OsIRX10 Leads to Decreased Xylan Content in Rice Culm Cell Walls and Improved Biomass Saccharification

(2012) Xuewei Chen et al.   Molecular Plant

Differential analysis of gene regulation at transcript resolution with RNA-seq

(2012) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Metabolic engineering of novel lignin in biomass crops

(2012) Ruben Vanholme et al.   NEW PHYTOLOGIST

Engineering secondary cell wall deposition in plants

(2012) Fan Yang et al.   PLANT BIOTECHNOLOGY JOURNAL

Cell wall composition throughout development for the model grass Brachypodium distachyon

(2012) David M. Rancour et al.   Frontiers in Plant Science

Plant Nucleotide Sugar Formation, Interconversion, and Salvage by Sugar Recycling*

(2011) Maor Bar-Peled et al.   Annual Review of Plant Biology

Down-regulation of UDP-glucuronic Acid Biosynthesis Leads to Swollen Plant Cell Walls and Severe Developmental Defects Associated with Changes in Pectic Polysaccharides

(2011) Rebecca Reboul et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Brachypodium as a model system for grass research

(2011) Philippe Vain   JOURNAL OF CEREAL SCIENCE

Effect of reduced ferulate-mediated lignin/arabinoxylan cross-linking in corn silage on feed intake, digestibility, and milk production1

(2011) H.G. Jung et al.   JOURNAL OF DAIRY SCIENCE

On–Off Switches for Secondary Cell Wall Biosynthesis

(2011) Huan-Zhong Wang et al.   Molecular Plant

Exploiting the Brachypodium Tool Box in cereal and grass research

(2011) Luis A. J. Mur et al.   NEW PHYTOLOGIST

psRNATarget: a plant small RNA target analysis server

(2011) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

Down-regulation of UDP-arabinopyranose mutase reduces the proportion of arabinofuranose present in rice cell walls

(2011) Tomoyuki Konishi et al.   PHYTOCHEMISTRY

The Interconversion of UDP-Arabinopyranose and UDP-Arabinofuranose Is Indispensable for Plant Development inArabidopsis

(2011) Carsten Rautengarten et al.   PLANT CELL

Brachypodium as a Model for the Grasses: Today and the Future

(2011) Jelena Brkljacic et al.   PLANT PHYSIOLOGY

Modifying crops to increase cell wall digestibility

(2011) Hans-Joachim G. Jung et al.   PLANT SCIENCE

Evolution of Plant Nucleotide-Sugar Interconversion Enzymes

(2011) Yanbin Yin et al.   PLoS One

Phenological growth stages of Brachypodium distachyon: codification and description

(2011) S-Y HONG et al.   WEED RESEARCH

Nucleotide and Nucleotide Sugar Analysis by Liquid Chromatography-Electrospray Ionization-Mass Spectrometry on Surface-Conditioned Porous Graphitic Carbon

(2010) Martin Pabst et al.   ANALYTICAL CHEMISTRY

Hemicelluloses

(2010) Henrik Vibe Scheller et al.   Annual Review of Plant Biology

A High-Throughput Platform for Screening Milligram Quantities of Plant Biomass for Lignocellulose Digestibility

(2010) Nicholas Santoro et al.   BioEnergy Research

Plant cell wall polymers as precursors for biofuels

(2010) Markus Pauly et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome sequencing and analysis of the model grass Brachypodium distachyon

(2010) John P. Vogel et al.   NATURE

Enzymatic processes involved in the incorporation of hydroxycinnamates into grass cell walls

(2010) R. D. Hatfield et al.   PHYTOCHEMISTRY REVIEWS

Over-expression of specific HvCslF cellulose synthase-like genes in transgenic barley increases the levels of cell wall (1,3;1,4)-β-d-glucans and alters their fine structure

(2010) Rachel A. Burton et al.   PLANT BIOTECHNOLOGY JOURNAL

Quantifying the Labeling and the Levels of Plant Cell Wall Precursors Using Ion Chromatography Tandem Mass Spectrometry

(2010) A. P. Alonso et al.   PLANT PHYSIOLOGY

Bifunctional cytosolic UDP-glucose 4-epimerases catalyse the interconversion between UDP-D-xylose and UDP-L-arabinose in plants

(2009) Toshihisa Kotake et al.   BIOCHEMICAL JOURNAL

Feruloylation in Grasses: Current and Future Perspectives

(2009) Marcia M. de O. Buanafina   Molecular Plant

Solution-state 2D NMR of ball-milled plant cell wall gels in DMSO-d6/pyridine-d5

(2009) Hoon Kim et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

A Novel Red Clover Hydroxycinnamoyl Transferase Has Enzymatic Activities Consistent with a Role in Phaselic Acid Biosynthesis

(2009) MichaelL. Sullivan   PLANT PHYSIOLOGY

Grass lignin acylation: p-coumaroyl transferase activity and cell wall characteristics of C3 and C4 grasses

(2009) Ronald D. Hatfield et al.   PLANTA

Cellulosic Biofuels

(2008) Andrew Carroll et al.   Annual Review of Plant Biology

QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR

(2008) Samuel Arvidsson et al.   BMC BIOINFORMATICS

Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR

(2008) Shin-Young Hong et al.   BMC PLANT BIOLOGY

Biochemical genetics of nucleotide sugar interconversion reactions

(2008) W REITER   CURRENT OPINION IN PLANT BIOLOGY

Cellulose synthesis: a complex complex

(2008) M MUTWIL et al.   CURRENT OPINION IN PLANT BIOLOGY

Designing the deconstruction of plant cell walls

(2008) M MCCANN et al.   CURRENT OPINION IN PLANT BIOLOGY

Efficient and High-Throughput Vector Construction and Agrobacterium-Mediated Transformation of Arabidopsis thaliana Suspension-Cultured Cells for Functional Genomics

(2008) Yoichi Ogawa et al.   PLANT AND CELL PHYSIOLOGY

Cell-wall carbohydrates and their modification as a resource for biofuels

(2008) Markus Pauly et al.   PLANT JOURNAL