Specific microbial gene abundances and soil parameters contribute to C, N, and greenhouse gas process rates after land use change in Southern Amazonian Soils

Land use, soil and litter chemistry drive bacterial community structures in samples of the rainforest and Cerrado (Brazilian Savannah) biomes in Southern Amazonia

(2015) Daniel Renato Lammel et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

lavaan: AnRPackage for Structural Equation Modeling

(2015) Yves Rosseel   Journal of Statistical Software

Latitudinal Distribution of Ammonia-Oxidizing Bacteria and Archaea in the Agricultural Soils of Eastern China

(2014) Hongchen Jiang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Livestock grazing on alpine soils causes changes in abiotic and biotic soil properties and thus in abundance and activity of microorganisms engaged in the methane cycle

(2014) Eva Maria Prem et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed

(2014) Jennifer D Rocca et al.   ISME Journal

Temporal and seasonal change in microbial community structure of an undisturbed, disturbed, and carbon-amended pasture soil

(2014) Bryan A. Stevenson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Recently identified microbial guild mediates soil N2O sink capacity

(2014) Christopher M. Jones et al.   Nature Climate Change

Soil N2O production and the δ15N–N2O value: Their relationship with nitrifying/denitrifying bacteria and archaea during a growing season of soybean in northeast China

(2013) Zongwei Xia et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

pH dominates variation in tropical soil archaeal diversity and community structure

(2013) Binu M. Tripathi et al.   FEMS MICROBIOLOGY ECOLOGY

Flavonoids: Their Structure, Biosynthesis and Role in the Rhizosphere, Including Allelopathy

(2013) Leslie A. Weston et al.   JOURNAL OF CHEMICAL ECOLOGY

Nitrous oxide emissions from soils: how well do we understand the processes and their controls?

(2013) K. Butterbach-Bahl et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Different Land Use Intensities in Grassland Ecosystems Drive Ecology of Microbial Communities Involved in Nitrogen Turnover in Soil

(2013) Annabel Meyer et al.   PLoS One

Impacts of naturally elevated soil CO2 concentrations on communities of soil archaea and bacteria

(2013) Nataša Šibanc et al.   SOIL BIOLOGY & BIOCHEMISTRY

Drivers for ammonia-oxidation along a land-use gradient in grassland soils

(2013) Barbara Stempfhuber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Archaeal Abundance across a pH Gradient in an Arable Soil and Its Relationship to Bacterial and Fungal Growth Rates

(2012) Per Bengtson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Experimental removal and addition of leaf litter inputs reduces nitrate production and loss in a lowland tropical forest

(2012) William R. Wieder et al.   BIOGEOCHEMISTRY

Abundance of microbial genes associated with nitrogen cycling as indices of biogeochemical process rates across a vegetation gradient in Alaska

(2012) Dorthe Groth Petersen et al.   ENVIRONMENTAL MICROBIOLOGY

Archaeal abundance in relation to root and fungal exudation rates

(2012) Anna E. Karlsson et al.   FEMS MICROBIOLOGY ECOLOGY

Soil enzymes in a changing environment: Current knowledge and future directions

(2012) Richard G. Burns et al.   SOIL BIOLOGY & BIOCHEMISTRY

Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation

(2012) James I. Prosser et al.   TRENDS IN MICROBIOLOGY

Heavy-Machinery Traffic Impacts Methane Emissions as Well as Methanogen Abundance and Community Structure in Oxic Forest Soils

(2011) Beat Frey et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Changes in Diversity and Functional Gene Abundances of Microbial Communities Involved in Nitrogen Fixation, Nitrification, and Denitrification in a Tidal Wetland versus Paddy Soils Cultivated for Different Time Periods

(2011) Andrea Bannert et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Denitrification regulatory phenotype, a new term for the characterization of denitrifying bacteria

(2011) Linda Bergaust et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Measuring the effects of pesticides on bacterial communities in soil: A critical review

(2011) Gwenaël Imfeld et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms

(2011) Daniel T Verhamme et al.   ISME Journal

The primary sources of carbon loss during the crop-establishment period in a subtropical Oxisol under contrasting tillage systems

(2011) Luciano Z. Pes et al.   SOIL & TILLAGE RESEARCH

Soil Resources Influence Spatial Patterns of Denitrifying Communities at Scales Compatible with Land Management

(2010) K. Enwall et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of pH and dissolved organic matter on the abundance of nirK and nirS denitrifiers in spruce forest soil

(2010) Jiří Bárta et al.   BIOGEOCHEMISTRY

Historical carbon emissions and uptake from the agricultural frontier of the Brazilian Amazon

(2010) Gillian L. Galford et al.   ECOLOGICAL APPLICATIONS

Bacterial gene abundances as indicators of greenhouse gas emission in soils

(2010) Sergio E Morales et al.   ISME Journal

Determinants of the distribution of nitrogen-cycling microbial communities at the landscape scale

(2010) D Bru et al.   ISME Journal

Examining the global distribution of dominant archaeal populations in soil

(2010) Scott T Bates et al.   ISME Journal

Serious Overestimation in Quantitative PCR by Circular (Supercoiled) Plasmid Standard: Microalgal pcna as the Model Gene

(2010) Yubo Hou et al.   PLoS One

Greenhouse gas emissions from alternative futures of deforestation and agricultural management in the southern Amazon

(2010) G. L. Galford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Changes in soil organic carbon storage under different agricultural management systems in the Southwest Amazon Region of Brazil

(2010) Stoécio M.F. Maia et al.   SOIL & TILLAGE RESEARCH

Impact of pasture, agriculture and crop-livestock systems on soil C stocks in Brazil

(2010) João Luís Nunes Carvalho et al.   SOIL & TILLAGE RESEARCH

Mutants of Taq DNA polymerase resistant to PCR inhibitors allow DNA amplification from whole blood and crude soil samples

(2009) M. B. Kermekchiev et al.   NUCLEIC ACIDS RESEARCH

Mitigating release of the potent greenhouse gas N2O from the nitrogen cycle – could enzymic regulation hold the key?

(2009) David Richardson et al.   TRENDS IN BIOTECHNOLOGY

Phylogenetic Comparison of the Methanogenic Communities from an Acidic, Oligotrophic Fen and an Anaerobic Digester Treating Municipal Wastewater Sludge

(2008) L. M. Steinberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenetic Analysis of Nitrite, Nitric Oxide, and Nitrous Oxide Respiratory Enzymes Reveal a Complex Evolutionary History for Denitrification

(2008) Christopher M. Jones et al.   MOLECULAR BIOLOGY AND EVOLUTION

Drought effects on litterfall, wood production and belowground carbon cycling in an Amazon forest: results of a throughfall reduction experiment

(2008) P. M Brando et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES