Standard filtration practices may significantly distort planktonic microbial diversity estimates
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Standard filtration practices may significantly distort planktonic microbial diversity estimates
Authors
Keywords
-
Journal
Frontiers in Microbiology
Volume 6, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2015-06-02
DOI
10.3389/fmicb.2015.00547
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter
- (2015) William D Orsi et al. ISME Journal
- Size-fraction partitioning of community gene transcription and nitrogen metabolism in a marine oxygen minimum zone
- (2015) Sangita Ganesh et al. ISME Journal
- Phylogenetic Differences in Attached and Free-Living Bacterial Communities in a Temperate Coastal Lagoon during Summer, Revealed via High-Throughput 16S rRNA Gene Sequencing
- (2014) Vani Mohit et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Evaluating Bias of Illumina-Based Bacterial 16S rRNA Gene Profiles
- (2014) Katherine Kennedy et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Comparison of bacterial communities on limnic versus coastal marine particles reveals profound differences in colonization
- (2014) Mina Bižić-Ionescu et al. ENVIRONMENTAL MICROBIOLOGY
- Composition and enzymatic function of particle-associated and free-living bacteria: a coastal/offshore comparison
- (2014) Lindsay D'Ambrosio et al. ISME Journal
- Metagenomic insights into particles and their associated microbiota in a coastal margin ecosystem
- (2014) Holly M. Simon et al. Frontiers in Microbiology
- Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
- (2013) James J. Kozich et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Design and Application of an Internal Amplification Control to Improve Dehalococcoides mccartyi 16S rRNA Gene Enumeration by qPCR
- (2013) Janet K. Hatt et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle
- (2013) Jody J Wright et al. ISME Journal
- Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone
- (2013) Sangita Ganesh et al. ISME Journal
- Contrasting genomic properties of free-living and particle-attached microbial assemblages within a coastal ecosystem
- (2013) Maria W. Smith et al. Frontiers in Microbiology
- Relationship between Abundance and Specific Activity of Bacterioplankton in Open Ocean Surface Waters
- (2012) Dana E. Hunt et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Free-living and aggregate-associated Planctomycetes in the Black Sea
- (2012) Clara A. Fuchsman et al. FEMS MICROBIOLOGY ECOLOGY
- Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic
- (2012) Lisa Zeigler Allen et al. ISME Journal
- Microbial ecology of expanding oxygen minimum zones
- (2012) Jody J. Wright et al. NATURE REVIEWS MICROBIOLOGY
- Experimental Incubations Elicit Profound Changes in Community Transcription in OMZ Bacterioplankton
- (2012) Frank J. Stewart et al. PLoS One
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- Metabolic strategies of free-living and aggregate-associated bacterial communities inferred from biologic and chemical profiles in the Black Sea suboxic zone
- (2011) Clara A. Fuchsman et al. FEMS MICROBIOLOGY ECOLOGY
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data
- (2010) Thomas J Hardcastle et al. BMC BIOINFORMATICS
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
- (2010) J. G. Caporaso et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ecological consequences of bacterioplankton lifestyles: changes in concepts are needed
- (2010) Hans-Peter Grossart Environmental Microbiology Reports
- Compositional differences in particle-associated and free-living microbial assemblages from an extreme deep-ocean environment
- (2010) Emiley A. Eloe et al. Environmental Microbiology Reports
- Comparison of free-living, suspended particle, and aggregate-associated Bacterial and Archaeal communities in the Laptev Sea
- (2009) CTE Kellogg et al. AQUATIC MICROBIAL ECOLOGY
- Diversity of total and active free-living vs. particle-attached bacteria in the euphotic zone of the NW Mediterranean Sea
- (2009) Jean-François Ghiglione et al. FEMS MICROBIOLOGY LETTERS
- Large Volume (20L+) Filtration of Coastal Seawater Samples
- (2009) David A. Walsh et al. Jove-Journal of Visualized Experiments
- Microbes Enriched in Seawater after Addition of Coral Mucus
- (2008) E. Allers et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microbial community gene expression in ocean surface waters
- (2008) J. Frias-Lopez et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now