Direct sequencing of human gut virome fractions obtained by flow cytometry

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Retrospective case-control study of viral pathogen screening in proliferative verrucous leukoplakia lesions

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Direct Sequencing from the Minimal Number of DNA Molecules Needed to Fill a 454 Picotiterplate

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Standards for Sequencing Viral Genomes in the Era of High-Throughput Sequencing

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A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes

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Sequencing platform and library preparation choices impact viral metagenomes

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Bacteriophages in Gut Samples From Pediatric Crohn’s Disease Patients

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Identification of Hepatotropic Viruses from Plasma Using Deep Sequencing: A Next Generation Diagnostic Tool

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Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences

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Study of the Viral and Microbial Communities Associated With Crohn’s Disease: A Metagenomic Approach

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Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method

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CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome

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Going viral: next-generation sequencing applied to phage populations in the human gut

(2012) Alejandro Reyes et al.   NATURE REVIEWS MICROBIOLOGY

Hypervariable loci in the human gut virome

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Quality control and preprocessing of metagenomic datasets

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Titration-free 454 sequencing using Y adapters

(2011) Zongli Zheng et al.   Nature Protocols

Single Virus Genomics: A New Tool for Virus Discovery

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genoPlotR: comparative gene and genome visualization in R

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Viruses in the faecal microbiota of monozygotic twins and their mothers

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Genomes of the T4-related bacteriophages as windows on microbial genome evolution

(2010) Vasiliy M Petrov et al.   Virology Journal

Laboratory procedures to generate viral metagenomes

(2009) Rebecca V Thurber et al.   Nature Protocols

phiSITE: database of gene regulation in bacteriophages

(2009) Lubos Klucar et al.   NUCLEIC ACIDS RESEARCH

Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals

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New dimensions of the virus world discovered through metagenomics

(2009) David M. Kristensen et al.   TRENDS IN MICROBIOLOGY

Amplification of Uncultured Single-Stranded DNA Viruses from Rice Paddy Soil

(2008) K.-H. Kim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Viral diversity and dynamics in an infant gut

(2008) Mya Breitbart et al.   RESEARCH IN MICROBIOLOGY

Metagenomic Analysis of Human Diarrhea: Viral Detection and Discovery

(2008) Stacy R. Finkbeiner et al.   PLoS Pathogens