Advancing biology through a deeper understanding of zebrafish ecology and evolution

Is pigment patterning in fish skin determined by the Turing mechanism?

(2015) Masakatsu Watanabe et al.   TRENDS IN GENETICS

Population-level personalities in zebrafish: aggression-boldness across but not within populations

(2014) E. P. Martins et al.   BEHAVIORAL ECOLOGY

A Defined Zebrafish Line for High-Throughput Genetics and Genomics: NHGRI-1

(2014) Matthew C. LaFave et al.   GENETICS

Wild Sex in Zebrafish: Loss of the Natural Sex Determinant in Domesticated Strains

(2014) C. A. Wilson et al.   GENETICS

Fish is Fish: the use of experimental model species to reveal causes of skeletal diversity in evolution and disease

(2014) M. P. Harris et al.   JOURNAL OF APPLIED ICHTHYOLOGY

Social behavior of zebrafish: From synthetic images to biological mechanisms of shoaling

(2014) Robert Gerlai   JOURNAL OF NEUROSCIENCE METHODS

Phylogeny of Zebrafish, a “Model Species,” within Danio, a “Model Genus”

(2014) Braedan M. McCluskey et al.   MOLECULAR BIOLOGY AND EVOLUTION

Origins of adult pigmentation: diversity in pigment stem cell lineages and implications for pattern evolution

(2014) David M. Parichy et al.   Pigment Cell & Melanoma Research

Sunscreen for Fish: Co-Option of UV Light Protection for Camouflage

(2014) Kaspar P. Mueller et al.   PLoS One

Thyroid hormone-dependent adult pigment cell lineage and pattern in zebrafish

(2014) S. K. McMenamin et al.   SCIENCE

Pigment cell interactions and differential xanthophore recruitment underlying zebrafish stripe reiteration and Danio pattern evolution

(2014) Larissa B. Patterson et al.   Nature Communications

Maturation of shoaling in two zebrafish strains: A behavioral and neurochemical analysis

(2013) Samantha Mahabir et al.   BEHAVIOURAL BRAIN RESEARCH

Iridophores and their interactions with other chromatophores are required for stripe formation in zebrafish

(2013) H. G. Frohnhofer et al.   DEVELOPMENT

Local Dkk1 Crosstalk from Breeding Ornaments Impedes Regeneration of Injured Male Zebrafish Fins

(2013) Junsu Kang et al.   DEVELOPMENTAL CELL

Zebrafish Breeding in the Laboratory Environment

(2013) A. Nasiadka et al.   ILAR JOURNAL

The zebrafish reference genome sequence and its relationship to the human genome

(2013) Kerstin Howe et al.   NATURE

The Quantitative Genetic Architecture of the Bold-Shy Continuum in Zebrafish, Danio rerio

(2013) Mary E. Oswald et al.   PLoS One

Mapping of Zebrafish Research: A Global Outlook

(2013) Priyamvadah Kinth et al.   Zebrafish

A Sequence-Based Variation Map of Zebrafish

(2013) Ashok Patowary et al.   Zebrafish

Natural History of Zebrafish (Danio rerio) in India

(2013) Muthukumarasamy Arunachalam et al.   Zebrafish

Interactions with Iridophores and the Tissue Environment Required for Patterning Melanophores and Xanthophores during Zebrafish Adult Pigment Stripe Formation

(2013) Larissa B. Patterson et al.   PLoS Genetics

Brain transcriptome variation among behaviorally distinct strains of zebrafish (Danio rerio)

(2012) Robert E Drew et al.   BMC GENOMICS

Microbiota Regulate Intestinal Absorption and Metabolism of Fatty Acids in the Zebrafish

(2012) Ivana Semova et al.   Cell Host & Microbe

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Polygenic Sex Determination System in Zebrafish

(2012) Woei Chang Liew et al.   PLoS One

Multiple Sex-Associated Regions and a Putative Sex Chromosome in Zebrafish Revealed by RAD Mapping and Population Genomics

(2012) Jennifer L. Anderson et al.   PLoS One

Intronic Cis-Regulatory Modules Mediate Tissue-Specific and Microbial Control of angptl4/fiaf Transcription

(2012) J. Gray Camp et al.   PLoS Genetics

Evidence for a core gut microbiota in the zebrafish

(2011) Guus Roeselers et al.   ISME Journal

Modulation of Fgfr1a Signaling in Zebrafish Reveals a Genetic Basis for the Aggression-Boldness Syndrome

(2011) W. H. J. Norton et al.   JOURNAL OF NEUROSCIENCE

Phylogenetic position of rasborin cyprinids and monophyly of major lineages among the Danioninae, based on morphological characters (Cypriniformes: Cyprinidae)

(2011) Te-Yu Liao et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

Population genomics of wild and laboratory zebrafish (Danio rerio)

(2011) ANDREW R. WHITELEY et al.   MOLECULAR ECOLOGY

A New System for the Rapid Collection of Large Numbers of Developmentally Staged Zebrafish Embryos

(2011) Isaac Adatto et al.   PLoS One

Extensive genetic diversity and substructuring among zebrafish strains revealed through copy number variant analysis

(2011) K. H. Brown et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An SNP-Based Linkage Map for Zebrafish Reveals Sex Determination Loci

(2011) Kevin M. Bradley et al.   G3-Genes Genomes Genetics

The world’s smallest vertebrate species of the genus Paedocypris: A new family of freshwater fishes and the sister group to the world’s most diverse clade of freshwater fishes (Teleostei: Cypriniformes)

(2010) Richard L. Mayden et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Systematics of the subfamily Danioninae (Teleostei: Cypriniformes: Cyprinidae)

(2010) Kevin L. Tang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88

(2010) S. E. Cheesman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dominance Hierarchies in Zebrafish (Danio rerio) and Their Relationship with Reproductive Success

(2010) Gregory C. Paull et al.   Zebrafish

Shoaling preferences and the effects of sex ratio on spawning and aggression in small laboratory populations of zebrafish (Danio rerio)

(2009) Nathan Ruhl et al.   LAB ANIMAL

Interactions between zebrafish pigment cells responsible for the generation of Turing patterns

(2009) A. Nakamasu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spectacular morphological novelty in a miniature cyprinid fish, Danionella dracula n. sp.

(2009) R. Britz et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Effect of a Depth Gradient on the Mating Behavior, Oviposition Site Preference, and Embryo Production in the Zebrafish, Danio rerio

(2009) Anna K. Sessa et al.   Zebrafish

Pigments, Patterns, and Fish Behavior

(2009) Anna C. Price et al.   Zebrafish

Molecular phylogenetic interrelationships of the south Asian cyprinid generaDanio, DevarioandMicrorasbora(Teleostei, Cyprinidae, Danioninae)

(2009) Fang Fang et al.   ZOOLOGICA SCRIPTA

Strain-specific alteration of zebrafish feeding behavior in response to aversive stimuli

(2008) M. Oswald et al.   CANADIAN JOURNAL OF ZOOLOGY

Genetic variation in strains of zebrafish (Danio rerio) and the implications for ecotoxicology studies

(2008) T. S. Coe et al.   ECOTOXICOLOGY

Sex-specific perceptual spaces for a vertebrate basal social aggregative behavior

(2008) R. E. Engeszer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA