The primary σ factor in Escherichia coli can access the transcription elongation complex from solution in vivo

Regulation of Transcript Elongation

(2015) Georgiy A. Belogurov et al.   Annual Review of Microbiology

Defining bacterial regulons using ChIP-seq

(2015) Kevin S. Myers et al.   METHODS

Bacterial Sigma Factors: A Historical, Structural, and Genomic Perspective

(2014) Andrey Feklístov et al.   Annual Review of Microbiology

Stress-Induced Remodeling of the Bacterial Proteome

(2014) Monica S. Guo et al.   CURRENT BIOLOGY

A pause sequence enriched at translation start sites drives transcription dynamics in vivo

(2014) M. H. Larson et al.   SCIENCE

Interactions between RNA polymerase and the "core recognition element" counteract pausing

(2014) I. O. Vvedenskaya et al.   SCIENCE

Phage-Encoded Inhibitor of Staphylococcus aureus Transcription Exerts Context-Dependent Effects on Promoter Function in a Modified Escherichia coli-Based Transcription System

(2013) C. Montero-Diez et al.   JOURNAL OF BACTERIOLOGY

Design of orthogonal genetic switches based on a crosstalk map of  s, anti- s, and promoters

(2013) V. A. Rhodius et al.   Molecular Systems Biology

Changes in transcriptional pausing modify the folding dynamics of the pH-responsive RNA element

(2013) Gal Nechooshtan et al.   NUCLEIC ACIDS RESEARCH

Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch

(2012) G. A. Perdrizet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Riboswitch control of Rho-dependent transcription termination

(2012) K. Hollands et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Initial transcribed region sequences influence the composition and functional properties of the bacterial elongation complex

(2011) P. Deighan et al.   GENES & DEVELOPMENT

σ70-dependent Transcription Pausing in Escherichia coli

(2011) Sarah A. Perdue et al.   JOURNAL OF MOLECULAR BIOLOGY

The β Subunit Gate Loop Is Required for RNA Polymerase Modification by RfaH and NusG

(2011) Anastasia Sevostyanova et al.   MOLECULAR CELL

Nascent transcript sequencing visualizes transcription at nucleotide resolution

(2011) L. Stirling Churchman et al.   NATURE

Comparative Study between Transcriptionally- and Translationally-Acting Adenine Riboswitches Reveals Key Differences in Riboswitch Regulatory Mechanisms

(2011) Jean-François Lemay et al.   PLoS Genetics

Reduced capacity of alternative  s to melt promoters ensures stringent promoter recognition

(2009) B.-M. Koo et al.   GENES & DEVELOPMENT

Regulator Trafficking on Bacterial Transcription Units In Vivo

(2009) Rachel A. Mooney et al.   MOLECULAR CELL

Mutational analysis ofEscherichia coliσ28and its target promoters reveals recognition of a composite −10 region, comprised of an ‘extended −10’ motif and a core −10 element

(2009) Byoung-Mo Koo et al.   MOLECULAR MICROBIOLOGY

Direct Detection of Abortive RNA Transcripts in Vivo

(2009) S. R. Goldman et al.   SCIENCE

Prevalence of RNA polymerase stalling at Escherichia coli promoters after open complex formation

(2008) Asma Hatoum et al.   MOLECULAR MICROBIOLOGY

Improved northern blot method for enhanced detection of small RNA

(2008) Gurman S Pall et al.   Nature Protocols

The elongation factor RfaH and the initiation factor   bind to the same site on the transcription elongation complex

(2008) A. Sevostyanova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA