3-Dimensional Imaging Modalities for Phenotyping Genetically Engineered Mice

Automated Segmentation of in Vivo and Ex Vivo Mouse Brain Magnetic Resonance Images

(2018) Alize E.H. Scheenstra et al.   Molecular Imaging

Mouse phenogenomics, toolbox for functional annotation of human genome

(2011) Il-Yong Kim et al.   BMB Reports

Phenotypic characterization of skeletal abnormalities of Osteopotentia mutant mice by micro-CT: a descriptive approach with emphasis on reconstruction techniques

(2011) Frank W. Roemer et al.   SKELETAL RADIOLOGY

Random mutagenesis of the mouse genome: a strategy for discovering gene function and the molecular basis of disease

(2010) Nhung Nguyen et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Micro-computed tomography-based phenotypic approaches in embryology: procedural artifacts on assessments of embryonic craniofacial growth and development

(2010) Eric J Schmidt et al.   BMC DEVELOPMENTAL BIOLOGY

Activation of p38 MAPK pathway in the skull abnormalities of Apert syndrome Fgfr2+P253R mice

(2010) Yingli Wang et al.   BMC DEVELOPMENTAL BIOLOGY

Down's syndrome-like cardiac developmental defects in embryos of the transchromosomic Tc1 mouse

(2010) Louisa Dunlevy et al.   CARDIOVASCULAR RESEARCH

Rapid 3D Phenotyping of Cardiovascular Development in Mouse Embryos by Micro-CT With Iodine Staining

(2010) Karl Degenhardt et al.   Circulation-Cardiovascular Imaging

Visualization of color anatomy and molecular fluorescence in whole-mouse cryo-imaging

(2010) Madhusudhana Gargesha et al.   COMPUTERIZED MEDICAL IMAGING AND GRAPHICS

The midregion, nuclear localization sequence, and C terminus of PTHrP regulate skeletal development, hematopoiesis, and survival in mice

(2010) Ramiro E. Toribio et al.   FASEB JOURNAL

Microcephalia with mandibular and dental dysplasia in adult Zmpste24-deficient mice

(2010) F. De Carlos et al.   JOURNAL OF ANATOMY

The intrinsic innervation of the lung is derived from neural crest cells as shown by optical projection tomography in Wnt1-Cre;YFP reporter mice

(2010) Lucy J. Freem et al.   JOURNAL OF ANATOMY

Guidelines for assessment of bone microstructure in rodents using micro-computed tomography

(2010) Mary L Bouxsein et al.   JOURNAL OF BONE AND MINERAL RESEARCH

Embryonic Wnt gene expression in the nitrofen-induced hypoplastic lung using 3-dimensional imaging

(2010) Hajime Takayasu et al.   JOURNAL OF PEDIATRIC SURGERY

Comparative SNR for high-throughput mouse embryo MR microscopy

(2010) Xiaoli Zhang et al.   MAGNETIC RESONANCE IN MEDICINE

Neural Crest-Specific Loss ofPrkar1aCauses Perinatal Lethality Resulting from Defects in Intramembranous Ossification

(2010) Georgette N. Jones et al.   MOLECULAR ENDOCRINOLOGY

Validation of MRI-based 3D digital atlas registration with histological and autoradiographic volumes: An anatomofunctional transgenic mouse brain imaging study

(2010) J. Lebenberg et al.   NEUROIMAGE

Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping

(2010) Jon O. Cleary et al.   NEUROIMAGE

Three-dimensional observation of the mouse embryo by micro-computed tomography: composition of the trigeminal ganglion

(2010) Hidekazu Aoyagi et al.   Odontology

Removal of subsurface fluorescence in cryo-imaging using deconvolution

(2010) Ganapathy Krishnamurthi et al.   OPTICS EXPRESS

Mouse embryonic phenotyping by morphometric analysis of MR images

(2010) M. Zamyadi et al.   PHYSIOLOGICAL GENOMICS

Magnetic Resonance Microscopy Defines Ethanol-Induced Brain Abnormalities in Prenatal Mice: Effects of Acute Insult on Gestational Day 8

(2009) Scott E. Parnell et al.   ALCOHOLISM-CLINICAL AND EXPERIMENTAL RESEARCH

Regionally reduced brain volume, altered serotonin neurochemistry, and abnormal behavior in mice null for the circadian rhythm output geneMagel2

(2009) Rebecca E. Mercer et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS

Three-Dimensional Anatomy of the Temporal Bone in Normal Mice

(2009) J. H. Lee et al.   ANATOMIA HISTOLOGIA EMBRYOLOGIA

3D Cryo-Imaging: A Very High-Resolution View of the Whole Mouse

(2009) Debashish Roy et al.   Anatomical Record-Advances in Integrative Anatomy and Evolutionary Biology

Removal of Out-of-Plane Fluorescence for Single Cell Visualization and Quantification in Cryo-Imaging

(2009) Grant J. Steyer et al.   ANNALS OF BIOMEDICAL ENGINEERING

The Functional Annotation of Mammalian Genomes: The Challenge of Phenotyping

(2009) Steve D.M. Brown et al.   Annual Review of Genetics

Time course and nature of brain atrophy in the MRL mouse model of central nervous system lupus

(2009) John G. Sled et al.   ARTHRITIS AND RHEUMATISM

3D MRI heart segmentation of mouse embryos

(2009) T. Zouagui et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Genetic dissection of the mouse CNS using magnetic resonance microscopy

(2009) Alexandra Badea et al.   CURRENT OPINION IN NEUROLOGY

MicroCT for developmental biology: A versatile tool for high-contrast 3D imaging at histological resolutions

(2009) Brian D. Metscher   DEVELOPMENTAL DYNAMICS

Genetic background influences embryonic lethality and the occurrence of neural tube defects in Men1 null mice: relevance to genetic modifiers

(2009) Manuel C Lemos et al.   JOURNAL OF ENDOCRINOLOGY

Three-dimensional micro-MRI analysis of cerebral artery development in mouse embryos

(2009) Cesar A. Berrios-Otero et al.   MAGNETIC RESONANCE IN MEDICINE

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain

(2009) Linda Madisen et al.   NATURE NEUROSCIENCE

Automated segmentation of mouse brain images using extended MRF

(2009) Min Hyeok Bae et al.   NEUROIMAGE

Cerebral asymmetries in 12-week-old C57Bl/6J mice measured by magnetic resonance imaging

(2009) Shoshana Spring et al.   NEUROIMAGE

Magnetic resonance imaging and micro-computed tomography combined atlas of developing and adult mouse brains for stereotaxic surgery

(2009) M. Aggarwal et al.   NEUROSCIENCE

Cardiac phenotyping inex vivomurine embryos usingµMRI

(2009) Jon O. Cleary et al.   NMR IN BIOMEDICINE

Interpreting Neonatal Lethal Phenotypes in Mouse Mutants: Insights Into Gene Function and Human Diseases

(2009) Benjamin Turgeon et al.   PHYSIOLOGICAL REVIEWS

In vivovirtual histology of mouse embryogenesis by ultrasound biomicroscopy and magnetic resonance imaging

(2009) P. Pallares et al.   REPRODUCTION FERTILITY AND DEVELOPMENT

High-Frequency Ultrasound Assessment of the Murine Heart From Embryo Through to Juvenile

(2009) Niamh Corrigan et al.   Reproductive Sciences

High-throughput micro-computed tomography imaging as a method to evaluate rat and rabbit fetal skeletal abnormalities for developmental toxicity studies

(2009) Christopher T. Winkelmann et al.   JOURNAL OF PHARMACOLOGICAL AND TOXICOLOGICAL METHODS

Abnormalities in brain structure and behavior in GSK-3alpha mutant mice

(2009) Oksana Kaidanovich-Beilin et al.   Molecular Brain

Optimization of Volumetric Computed Tomography for Skeletal Analysis of Model Genetic Organisms

(2008) Sergio X. Vasquez et al.   Anatomical Record-Advances in Integrative Anatomy and Evolutionary Biology

Endothelial Nitric Oxide Synthase Gene Expression During Murine Embryogenesis

(2008) Anouk-Martine Teichert et al.   CIRCULATION RESEARCH

Episcopic 3D Imaging Methods: Tools for Researching Gene Function

(2008) Wolfgang Weninger et al.   CURRENT GENOMICS

The IRG mouse: A two-color fluorescent reporter for assessing Cre-mediated recombination and imaging complex cellular relationships in situ

(2008) Rita De Gasperi et al.   GENESIS

Phenotypic variability and craniofacial dysmorphology: increased shape variance in a mouse model for cleft lip

(2008) Trish E. Parsons et al.   JOURNAL OF ANATOMY

Rapid 3-Dimensional Imaging of Embryonic Craniofacial Morphology Using Microscopic Computed Tomography

(2008) Takashi Nagase et al.   JOURNAL OF COMPUTER ASSISTED TOMOGRAPHY

Enhancement of histological volumes through averaging and their use for the analysis of magnetic resonance images

(2008) Xia Li et al.   MAGNETIC RESONANCE IMAGING

High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice

(2008) A.E. Dorr et al.   NEUROIMAGE

In vivosmall-animal imaging using micro-CT and digital subtraction angiography

(2008) C T Badea et al.   PHYSICS IN MEDICINE AND BIOLOGY

Three-Dimensional Analysis of Vascular Development in the Mouse Embryo

(2008) Johnathon R. Walls et al.   PLoS One

High-resolution magnetic resonance histology of the embryonic and neonatal mouse: A 4D atlas and morphologic database

(2008) A. E. Petiet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In vivo quantification of embryonic and placental growth during gestation in mice using micro-ultrasound

(2008) Junwu Mu et al.   Reproductive Biology and Endocrinology

Bone microstructure and its associated genetic variability in 12 inbred mouse strains: μCT study and in silico genome scan

(2007) Ilya Sabsovich et al.   BONE

Automated deformation analysis in the YAC128 Huntington disease mouse model

(2007) Jason P. Lerch et al.   NEUROIMAGE

Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy

(2007) Anjum A. Sharief et al.   NEUROIMAGE