454-Pyrosequencing Analysis of Bacterial Communities from Autotrophic Nitrogen Removal Bioreactors Utilizing Universal Primers: Effect of Annealing Temperature

Kraken: ultrafast metagenomic sequence classification using exact alignments

(2014) Derrick E Wood et al.   GENOME BIOLOGY

Nitrogen Removal by a Nitritation-Anammox Bioreactor at Low Temperature

(2013) Ziye Hu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Broad Distribution of Diverse Anaerobic Ammonium-Oxidizing Bacteria in Chinese Agricultural Soils

(2013) Li-dong Shen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A comparison of two 16S rRNA gene-based PCR primer sets in unraveling anammox bacteria from different environmental samples

(2013) Ping Han et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Robust estimation of microbial diversity in theory and in practice

(2013) Bart Haegeman et al.   ISME Journal

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone

(2013) Sangita Ganesh et al.   ISME Journal

Whole-Genome Thermodynamic Analysis Reduces siRNA Off-Target Effects

(2013) Xi Chen et al.   PLoS One

High-Throughput System for the Presentation of Secreted and Surface-Exposed Proteins from Gram-Positive Bacteria in Functional Metagenomics Studies

(2013) Dragana Dobrijevic et al.   PLoS One

Development of a Highly Sensitive Immuno-PCR Assay for the Measurement of α-Galactosidase A Protein Levels in Serum and Plasma

(2013) Sachie Nakano et al.   PLoS One

Nitrogen removal through different pathways in an aged refuse bioreactor treating mature landfill leachate

(2012) Bing Xie et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Biodiversity and quantification of functional bacteria in completely autotrophic nitrogen-removal over nitrite (CANON) process

(2012) Tao Liu et al.   BIORESOURCE TECHNOLOGY

Anaerobic ammonia oxidation (ANAMMOX) for side-stream treatment of anaerobic digester filtrate process performance and microbiology

(2012) Shireen M. Kotay et al.   BIOTECHNOLOGY AND BIOENGINEERING

Models and estimators linking individual-based and sample-based rarefaction, extrapolation and comparison of assemblages

(2012) R. K. Colwell et al.   Journal of Plant Ecology

High-Throughput Sequencing of 16S rRNA Gene Amplicons: Effects of Extraction Procedure, Primer Length and Annealing Temperature

(2012) Martin J. Sergeant et al.   PLoS One

Nitrogen management in landfill leachate: Application of SHARON, ANAMMOX and combined SHARON–ANAMMOX process

(2012) S. Sri Shalini et al.   WASTE MANAGEMENT

Metagenome Analysis of a Complex Community Reveals the Metabolic Blueprint of Anammox Bacterium “Candidatus Jettenia asiatica”

(2012) Ziye Hu et al.   Frontiers in Microbiology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Microbial and Physicochemical Characteristics of Compact Anaerobic Ammonium-Oxidizing Granules in an Upflow Anaerobic Sludge Blanket Reactor

(2010) B. J. Ni et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

(2010) Marcus J. Claesson et al.   NUCLEIC ACIDS RESEARCH

Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment

(2009) Pilar Junier et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Biochemistry and molecular biology of anammox bacteria

(2009) Mike S. M. Jetten et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

The bacterial diversity in an anaerobic ammonium-oxidizing (anammox) reactor community

(2009) Xiao-Ran Li et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Quantification of the Detrimental Effect of a Single Primer-Template Mismatch by Real-Time PCR Using the 16S rRNA Gene as an Example

(2008) D. Bru et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The membrane bioreactor: A novel tool to grow anammox bacteria as free cells

(2008) Wouter R.L. van der Star et al.   BIOTECHNOLOGY AND BIOENGINEERING

Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)

(2008) Scot E Dowd et al.   BMC MICROBIOLOGY

Diversity of ammonium-oxidizing bacteria in a granular sludge anaerobic ammonium-oxidizing (anammox) reactor

(2008) Zhe-Xue Quan et al.   ENVIRONMENTAL MICROBIOLOGY