The Evolutionary Origination and Diversification of a Dimorphic Gene Regulatory Network through Parallel Innovations in cis and trans

The expansion of body coloration involves coordinated evolution in cis and trans within the pigmentation regulatory network of Drosophila prostipennis

(2014) Alison J. Ordway et al.   DEVELOPMENTAL BIOLOGY

The function of Hox and appendage-patterning genes in the development of an evolutionary novelty, the Photuris firefly lantern

(2014) M. S. Stansbury et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A survey of the trans-regulatory landscape for Drosophila melanogaster abdominal pigmentation

(2013) William A. Rogers et al.   DEVELOPMENTAL BIOLOGY

The evolution of Bab paralog expression and abdominal pigmentation amongSophophorafruit fly species

(2013) Joseph R. Salomone et al.   EVOLUTION & DEVELOPMENT

Role of a polymorphism in a Hox/Pax-responsive enhancer in the evolution of the vertebrate spine

(2013) I. Guerreiro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Emergence and Diversification of Fly Pigmentation Through Evolution of a Gene Regulatory Module

(2013) L. Arnoult et al.   SCIENCE

Recurrent Modification of a Conserved Cis-Regulatory Element Underlies Fruit Fly Pigmentation Diversity

(2013) William A. Rogers et al.   PLoS Genetics

Ancestral Developmental Potential Facilitates Parallel Evolution in Ants

(2012) R. Rajakumar et al.   SCIENCE

Morphological evolution caused by many subtle-effect substitutions in regulatory DNA

(2011) Nicolás Frankel et al.   NATURE

Evolutionary origin of a novel gene expression pattern through co-option of the latent activities of existing regulatory sequences

(2011) M. Rebeiz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of Sex-Specific Traits through Changes in HOX-Dependent doublesex Expression

(2011) Kohtaro Tanaka et al.   PLOS BIOLOGY

Composite Effects of Polymorphisms near Multiple Regulatory Elements Create a Major-Effect QTL

(2011) Ryan D. Bickel et al.   PLoS Genetics

Parallelism as the pattern and process of mesoevolution

(2010) Ehab Abouheif   EVOLUTION & DEVELOPMENT

Generation of a novel wing colour pattern by the Wingless morphogen

(2010) Thomas Werner et al.   NATURE

Nomadic Enhancers: Tissue-Specific cis-Regulatory Elements of yellow Have Divergent Genomic Positions among Drosophila Species

(2010) Gizem Kalay et al.   PLoS Genetics

Intraspecific Polymorphism to Interspecific Divergence: Genetics of Pigmentation in Drosophila

(2009) P. J. Wittkopp et al.   SCIENCE

Stepwise Modification of a Modular Enhancer Underlies Adaptation in a Drosophila Population

(2009) M. Rebeiz et al.   SCIENCE

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

(2009) Y. F. Chan et al.   SCIENCE

Rapid Evolution of Sex Pheromone-Producing Enzyme Expression in Drosophila

(2009) Troy R. Shirangi et al.   PLOS BIOLOGY

Evolution of a Novel Appendage Ground Plan in Water Striders Is Driven by Changes in the Hox Gene Ultrabithorax

(2009) Abderrahman Khila et al.   PLoS Genetics

The Evolution of Gene Regulation Underlies a Morphological Difference between Two Drosophila Sister Species

(2008) Sangyun Jeong et al.   CELL

Analysis of Homeodomain Specificities Allows the Family-wide Prediction of Preferred Recognition Sites

(2008) Marcus B. Noyes et al.   CELL

The Regulation and Evolution of a Genetic Switch Controlling Sexually Dimorphic Traits in Drosophila

(2008) Thomas M. Williams et al.   CELL

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

(2008) Sean B. Carroll   CELL

cis-Regulatory networks during development: a view of Drosophila

(2008) Stefan Bonn et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Hox and Senseless Antagonism Functions as a Molecular Switch to Regulate EGF Secretion in the Drosophila PNS

(2008) David Li-Kroeger et al.   DEVELOPMENTAL CELL

THE LOCI OF EVOLUTION: HOW PREDICTABLE IS GENETIC EVOLUTION?

(2008) David L. Stern et al.   EVOLUTION

Regulatory divergence modifies limb length between mammals

(2008) C. J. Cretekos et al.   GENES & DEVELOPMENT

Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes

(2008) Michele Markstein et al.   NATURE GENETICS

Human-Specific Gain of Function in a Developmental Enhancer

(2008) S. Prabhakar et al.   SCIENCE

Evolution Acts on Enhancer Organization to Fine-Tune Gradient Threshold Readouts

(2008) Justin Crocker et al.   PLOS BIOLOGY