Systems Biology of Tissue-Specific Response to Anaplasma phagocytophilum Reveals Differentiated Apoptosis in the Tick Vector Ixodes scapularis

Anaplasma phagocytophilum Up-regulates some Anti-apoptotic Genes in Neutrophils and Pro-inflammatory Genes in Mononuclear Cells of Sheep

(2014) Z. Woldehiwet et al.   JOURNAL OF COMPARATIVE PATHOLOGY

General Statistical Framework for Quantitative Proteomics by Stable Isotope Labeling

(2014) Pedro Navarro et al.   JOURNAL OF PROTEOME RESEARCH

Diversity and dynamics of the Drosophila transcriptome

(2014) James B. Brown et al.   NATURE

A Systems Biology Approach to the Characterization of Stress Response in Dermacentor reticulatus Tick Unfed Larvae

(2014) Margarita Villar et al.   PLoS One

Fatty Acid Synthase Inhibitors Induce Apoptosis in Non-Tumorigenic Melan-A Cells Associated with Inhibition of Mitochondrial Respiration

(2014) Franco A. Rossato et al.   PLoS One

Effector bottleneck: microbial reprogramming of parasitized host cell transcription by epigenetic remodeling of chromatin structure

(2014) Sara H. Sinclair et al.   Frontiers in Genetics

Biochemical changes accompanying apoptotic cell death in retinoblastoma cancer cells treated with lipogenic enzyme inhibitors

(2013) Suryanarayanan Vandhana et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Anaplasma phagocytophilum Inhibits Apoptosis and Promotes Cytoskeleton Rearrangement for Infection of Tick Cells

(2013) Nieves Ayllón et al.   INFECTION AND IMMUNITY

The E3 Ubiquitin Ligase XIAP Restricts Anaplasma phagocytophilum Colonization of Ixodes scapularis Ticks

(2013) Maiara S. Severo et al.   JOURNAL OF INFECTIOUS DISEASES

Gene Expression of Tissue-Specific Molecules in Ex vivoDermacentor variabilis(Acari: Ixodidae) During Rickettsial Exposure

(2013) Piyanate Sunyakumthorn et al.   JOURNAL OF MEDICAL ENTOMOLOGY

Reciprocal Regulation of NF-kB (Relish) and Subolesin in the Tick Vector, Ixodes scapularis

(2013) Victoria Naranjo et al.   PLoS One

Vaccinomics, the new road to tick vaccines

(2013) José de la Fuente et al.   VACCINE

Interaction of the tick immune system with transmitted pathogens

(2013) Ondřej Hajdušek et al.   Frontiers in Cellular and Infection Microbiology

Anaplasma phagocytophilum—a widespread multi-host pathogen with highly adaptive strategies

(2013) Snorre Stuen et al.   Frontiers in Cellular and Infection Microbiology

Postgenomic Analyses Reveal Development of Infectious Anaplasma phagocytophilum during Transmission from Ticks to Mice

(2012) J. E. Mastronunzio et al.   JOURNAL OF BACTERIOLOGY

Sheep experimentally infected with a human isolate of Anaplasma phagocytophilum serve as a host for infection of Ixodes scapularis ticks

(2012) Katherine M. Kocan et al.   Ticks and Tick-Borne Diseases

Increasing Incidence of Ehrlichia chaffeensis and Anaplasma phagocytophilum in the United States, 2000–2007

(2011) F. Scott Dahlgren et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Quantitative in-depth analysis of the dynamic secretome of activated Jurkat T-cells

(2011) Elena Bonzon-Kulichenko et al.   Journal of Proteomics

Advances in Omics and Bioinformatics Tools for Systems Analyses of Plant Functions

(2011) K. Mochida et al.   PLANT AND CELL PHYSIOLOGY

Bcl-2 proteins and mitochondria—Specificity in membrane targeting for death

(2010) Jennefer Lindsay et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Applications of next generation sequencing in molecular ecology of non-model organisms

(2010) R Ekblom et al.   HEREDITY

Inhibition of fatty acid synthase in melanoma cells activates the intrinsic pathway of apoptosis

(2010) Karina G Zecchin et al.   LABORATORY INVESTIGATION

Software Tool for Researching Annotations of Proteins: Open-Source Protein Annotation Software with Data Visualization

(2009) Vivek N. Bhatia et al.   ANALYTICAL CHEMISTRY

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

A Refined Method To Calculate False Discovery Rates for Peptide Identification Using Decoy Databases

(2009) Pedro Navarro et al.   JOURNAL OF PROTEOME RESEARCH

Statistical Model to Analyze Quantitative Proteomics Data Obtained by18O/16O Labeling and Linear Ion Trap Mass Spectrometry

(2009) Inmaculada Jorge et al.   MOLECULAR & CELLULAR PROTEOMICS

Universal sample preparation method for proteome analysis

(2009) Jacek R Wiśniewski et al.   NATURE METHODS

Functional genomics and evolution of tick–Anaplasma interactions and vaccine development

(2009) José de la Fuente et al.   VETERINARY PARASITOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Overview: Ticks as vectors of pathogens that cause disease in humans and animals

(2008) Jose de la Fuente   Frontiers in Bioscience-Landmark

Anaplasma phagocytophilum-induced gene expression in both human neutrophils and HL-60 cells

(2008) Hin C. Lee et al.   GENOMICS

Properties of Average Score Distributions of SEQUEST

(2008) Salvador Martínez-Bartolomé et al.   MOLECULAR & CELLULAR PROTEOMICS

Inoculation of White-Tailed Deer (Odocoileus Virginianus) with Ap-V1 Or NY-18 Strains of Anaplasma Phagocytophilum and Microscopic Demonstration of Ap-V1 In Ixodes Scapularis Adults that Acquired Infection from Deer as Nymphs

(2008) Mason V. Reichard et al.   VECTOR-BORNE AND ZOONOTIC DISEASES