Reprogramming LCLs to iPSCs Results in Recovery of Donor-Specific Gene Expression Signature

The Effect of Freeze-Thaw Cycles on Gene Expression Levels in Lymphoblastoid Cell Lines

(2014) Minal Çalışkan et al.   PLoS One

Methylation QTLs Are Associated with Coordinated Changes in Transcription Factor Binding, Histone Modifications, and Gene Expression Levels

(2014) Nicholas E. Banovich et al.   PLoS Genetics

Genetic Background Drives Transcriptional Variation in Human Induced Pluripotent Stem Cells

(2014) Foad Rouhani et al.   PLoS Genetics

Clonal genetic and hematopoietic heterogeneity among human-induced pluripotent stem cell lines

(2013) J. A. Mills et al.   BLOOD

Lynx: a database and knowledge extraction engine for integrative medicine

(2013) Dinanath Sulakhe et al.   NUCLEIC ACIDS RESEARCH

The Impact of Gene Expression Variation on the Robustness and Evolvability of a Developmental Gene Regulatory Network

(2013) David A. Garfield et al.   PLOS BIOLOGY

The sva package for removing batch effects and other unwanted variation in high-throughput experiments

(2012) Jeffrey T. Leek et al.   BIOINFORMATICS

Correction for Kajiwara et al., Donor-dependent variations in hepatic differentiation from human-induced pluripotent stem cells

(2012)   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Human lymphoblastoid B-cell lines reprogrammed to EBV-free induced pluripotent stem cells

(2011) D. Rajesh et al.   BLOOD

Reprogramming of EBV-immortalized B-lymphocyte cell lines into induced pluripotent stem cells

(2011) S. M. Choi et al.   BLOOD

Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent

(2011) J. E. Powell et al.   GENOME RESEARCH

An eQTL-based method identifies CTTN and ZMAT3 as pemetrexed susceptibility markers

(2011) Yujia Wen et al.   HUMAN MOLECULAR GENETICS

The effects of EBV transformation on gene expression levels and methylation profiles

(2011) Minal Çalışkan et al.   HUMAN MOLECULAR GENETICS

A functionally characterized test set of human induced pluripotent stem cells

(2011) Gabriella L Boulting et al.   NATURE BIOTECHNOLOGY

A bioinformatic assay for pluripotency in human cells

(2011) Franz-Josef Müller et al.   NATURE METHODS

A more efficient method to generate integration-free human iPS cells

(2011) Keisuke Okita et al.   NATURE METHODS

Germline polymorphisms discovered via a cell-based, genome-wide approach predict platinum response in head and neck cancers

(2011) Dana Ziliak et al.   Translational Research

Variability of gene expression profiles in human blood and lymphoblastoid cell lines

(2010) Josine L Min et al.   BMC GENOMICS

Understanding mechanisms underlying human gene expression variation with RNA sequencing

(2010) Joseph K. Pickrell et al.   NATURE

Heritable and non-genetic factors as variables of pharmacologic phenotypes in lymphoblastoid cell lines

(2010) A L Stark et al.   PHARMACOGENOMICS JOURNAL

Acetaminophen-NAPQI Hepatotoxicity: A Cell Line Model System Genome-Wide Association Study

(2010) Ann M. Moyer et al.   TOXICOLOGICAL SCIENCES

lumi: a pipeline for processing Illumina microarray

(2008) P. Du et al.   BIOINFORMATICS

Genetic variants associated with carboplatin-induced cytotoxicity in cell lines derived from Africans

(2008) R. S. Huang et al.   MOLECULAR CANCER THERAPEUTICS

Extreme Clonality in Lymphoblastoid Cell Lines with Implications for Allele Specific Expression Analyses

(2008) Vincent Plagnol et al.   PLoS One

Genetic Analysis of Human Traits In Vitro: Drug Response and Gene Expression in Lymphoblastoid Cell Lines

(2008) Edwin Choy et al.   PLoS Genetics

Developmental Constraints on Vertebrate Genome Evolution

(2008) Julien Roux et al.   PLoS Genetics