A General Framework for Thermodynamically Consistent Parameterization and Efficient Sampling of Enzymatic Reactions

Coordination of microbial metabolism

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Towards kinetic modeling of genome-scale metabolic networks without sacrificing stoichiometric, thermodynamic and physiological constraints

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Understanding allosteric and cooperative interactions in enzymes

(2013) Athel Cornish-Bowden   FEBS Journal

50 years of allosteric interactions: the twists and turns of the models

(2013) Jean-Pierre Changeux   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Ultrasensitive regulation of anapleurosis via allosteric activation of PEP carboxylase

(2012) Yi-Fan Xu et al.   Nature Chemical Biology

Homotropic allosteric regulation in monomeric mammalian glucokinase

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An adaptive sequential Monte Carlo method for approximate Bayesian computation

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Modular rate laws for enzymatic reactions: thermodynamics, elasticities and implementation

(2010) Wolfram Liebermeister et al.   BIOINFORMATICS

Modeling of uncertainties in biochemical reactions

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Generating rate equations for complex enzyme systems by a computer-assisted systematic method

(2009) Feng Qi et al.   BMC BIOINFORMATICS

Ensemble Modeling of Metabolic Networks

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Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems

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