Improved Estimation and Interpretation of Correlations in Neural Circuits

A Cortical Circuit for Gain Control by Behavioral State

(2014) Yu Fu et al.   CELL

Mouse Visual Neocortex Supports Multiple Stereotyped Patterns of Microcircuit Activity

(2014) A. J. Sadovsky et al.   JOURNAL OF NEUROSCIENCE

Pupil Fluctuations Track Fast Switching of Cortical States during Quiet Wakefulness

(2014) Jacob Reimer et al.   NEURON

State Dependence of Noise Correlations in Macaque Primary Visual Cortex

(2014) Alexander S. Ecker et al.   NEURON

Spatial and Temporal Scales of Neuronal Correlation in Visual Area V4

(2013) M. A. Smith et al.   JOURNAL OF NEUROSCIENCE

Detecting cell assemblies in large neuronal populations

(2013) Vítor Lopes-dos-Santos et al.   JOURNAL OF NEUROSCIENCE METHODS

The emergence of functional microcircuits in visual cortex

(2013) Ho Ko et al.   NATURE

Whole-brain functional imaging at cellular resolution using light-sheet microscopy

(2013) Misha B Ahrens et al.   NATURE METHODS

Stimulus-dependent variability and noise correlations in cortical MT neurons

(2013) A. Ponce-Alvarez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Neural progenitors organize in small-world networks to promote cell proliferation

(2013) S. Malmersjo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Brain Activity Map

(2013) A. P. Alivisatos et al.   SCIENCE

Three-dimensional mapping of microcircuit correlation structure

(2013) R. James Cotton et al.   Frontiers in Neural Circuits

Imaging zebrafish neural circuitry from whole brain to synapse

(2013) Louis C. Leung et al.   Frontiers in Neural Circuits

Laminar dependence of neuronal correlations in visual cortex

(2012) Matthew A. Smith et al.   JOURNAL OF NEUROPHYSIOLOGY

Population Rate Dynamics and Multineuron Firing Patterns in Sensory Cortex

(2012) M. Okun et al.   JOURNAL OF NEUROSCIENCE

Spatial Profile of Excitatory and Inhibitory Synaptic Connectivity in Mouse Primary Auditory Cortex

(2012) R. B. Levy et al.   JOURNAL OF NEUROSCIENCE

A Fast and Simple Population Code for Orientation in Primate V1

(2012) P. Berens et al.   JOURNAL OF NEUROSCIENCE

Markov models for fMRI correlation structure: Is brain functional connectivity small world, or decomposable into networks?

(2012) G. Varoquaux et al.   JOURNAL OF PHYSIOLOGY-PARIS

On the use of correlation as a measure of network connectivity

(2012) Andrew Zalesky et al.   NEUROIMAGE

Correlated Variability in Laminar Cortical Circuits

(2012) Bryan J. Hansen et al.   NEURON

Dense, Unspecific Connectivity of Neocortical Parvalbumin-Positive Interneurons: A Canonical Microcircuit for Inhibition?

(2011) A. M. Packer et al.   JOURNAL OF NEUROSCIENCE

The Effect of Noise Correlations in Populations of Diversely Tuned Neurons

(2011) A. S. Ecker et al.   JOURNAL OF NEUROSCIENCE

Functional specificity of local synaptic connections in neocortical networks

(2011) Ho Ko et al.   NATURE

Differential connectivity and response dynamics of excitatory and inhibitory neurons in visual cortex

(2011) Sonja B Hofer et al.   NATURE NEUROSCIENCE

Mechanisms That Modulate the Transfer of Spiking Correlations

(2011) Robert Rosenbaum et al.   NEURAL COMPUTATION

Estimation of functional connectivity in fMRI data using stability selection-based sparse partial correlation with elastic net penalty

(2011) Srikanth Ryali et al.   NEUROIMAGE

Perceptual Learning Reduces Interneuronal Correlations in Macaque Visual Cortex

(2011) Yong Gu et al.   NEURON

Dense Inhibitory Connectivity in Neocortex

(2011) Elodie Fino et al.   NEURON

How Inhibition Shapes Cortical Activity

(2011) Jeffry S. Isaacson et al.   NEURON

Neuronal Assembly Detection and Cell Membership Specification by Principal Component Analysis

(2011) Vítor Lopes-dos-Santos et al.   PLoS One

Reassessing optimal neural population codes with neurometric functions

(2011) P. Berens et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sparse low-order interaction network underlies a highly correlated and learnable neural population code

(2011) E. Ganmor et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A synaptic organizing principle for cortical neuronal groups

(2011) R. Perin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dissecting functional connectivity of neuronal microcircuits: experimental and theoretical insights

(2011) Sarah Feldt et al.   TRENDS IN NEUROSCIENCES

Fast Nonnegative Deconvolution for Spike Train Inference From Population Calcium Imaging

(2010) Joshua T. Vogelstein et al.   JOURNAL OF NEUROPHYSIOLOGY

Lateral competition for cortical space by layer-specific horizontal circuits

(2010) Hillel Adesnik et al.   NATURE

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision

(2010) Benjamin F Grewe et al.   NATURE METHODS

Functional organization and population dynamics in the mouse primary auditory cortex

(2010) Gideon Rothschild et al.   NATURE NEUROSCIENCE

Decorrelated Neuronal Firing in Cortical Microcircuits

(2010) A. S. Ecker et al.   SCIENCE

The Asynchronous State in Cortical Circuits

(2010) A. Renart et al.   SCIENCE

Guaranteed Minimum-Rank Solutions of Linear Matrix Equations via Nuclear Norm Minimization

(2010) Benjamin Recht et al.   SIAM REVIEW

Correlations and brain states: from electrophysiology to functional imaging

(2009) Adam Kohn et al.   CURRENT OPINION IN NEUROBIOLOGY

Principal component analysis of ensemble recordings reveals cell assemblies at high temporal resolution

(2009) Adrien Peyrache et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

The Structure of Large-Scale Synchronized Firing in Primate Retina

(2009) J. Shlens et al.   JOURNAL OF NEUROSCIENCE

How Connectivity, Background Activity, and Synaptic Properties Shape the Cross-Correlation between Spike Trains

(2009) S. Ostojic et al.   JOURNAL OF NEUROSCIENCE

Internally Mediated Developmental Desynchronization of Neocortical Network Activity

(2009) P. Golshani et al.   JOURNAL OF NEUROSCIENCE

Partial Correlation Estimation by Joint Sparse Regression Models

(2009) Jie Peng et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Basal forebrain activation enhances cortical coding of natural scenes

(2009) Michael Goard et al.   NATURE NEUROSCIENCE

Attention improves performance primarily by reducing interneuronal correlations

(2009) Marlene R Cohen et al.   NATURE NEUROSCIENCE

Stimulus-Dependent Correlations and Population Codes

(2009) Krešimir Josić et al.   NEURAL COMPUTATION

Pairwise Maximum Entropy Models for Studying Large Biological Systems: When They Can Work and When They Can't

(2009) Yasser Roudi et al.   PLoS Computational Biology

A Small World of Neuronal Synchrony

(2008) Shan Yu et al.   CEREBRAL CORTEX

Maturation of Intrinsic and Synaptic Properties of Layer 2/3 Pyramidal Neurons in Mouse Auditory Cortex

(2008) Anne-Marie M. Oswald et al.   JOURNAL OF NEUROPHYSIOLOGY

A Maximum Entropy Model Applied to Spatial and Temporal Correlations from Cortical Networks In Vitro

(2008) A. Tang et al.   JOURNAL OF NEUROSCIENCE

Spatial and Temporal Scales of Neuronal Correlation in Primary Visual Cortex

(2008) M. A. Smith et al.   JOURNAL OF NEUROSCIENCE

Spatio-temporal correlations and visual signalling in a complete neuronal population

(2008) Jonathan W. Pillow et al.   NATURE

Population imaging of ongoing neuronal activity in the visual cortex of awake rats

(2008) David S Greenberg et al.   NATURE NEUROSCIENCE

Context-Dependent Changes in Functional Circuitry in Visual Area MT

(2008) Marlene R. Cohen et al.   NEURON