Structural and Energetic Characterization of the Ankyrin Repeat Protein Family

Repeat proteins challenge the concept of structural domains

(2015) R. Espada et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Capturing coevolutionary signals inrepeat proteins

(2015) Rocío Espada et al.   BMC BIOINFORMATICS

ConSole: using modularity of Contact maps to locate Solenoid domains in protein structures

(2014) Thomas Hrabe et al.   BMC BIOINFORMATICS

Identifying tandem Ankyrin repeats in protein structures

(2014) Broto Chakrabarty et al.   BMC BIOINFORMATICS

Frustration in biomolecules

(2014) Diego U. Ferreiro et al.   QUARTERLY REVIEWS OF BIOPHYSICS

Structure-Based Characterization of Multiprotein Complexes

(2014) Markus Wiederstein et al.   STRUCTURE

Detecting Repetitions and Periodicities in Proteins by Tiling the Structural Space

(2013) R. Gonzalo Parra et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Effects of Ligand Binding on the Mechanical Properties of Ankyrin Repeat Protein Gankyrin

(2013) Giovanni Settanni et al.   PLoS Computational Biology

Stabilizing Proteins from Sequence Statistics: The Interplay of Conservation and Correlation in Triosephosphate Isomerase Stability

(2012) Brandon J. Sullivan et al.   JOURNAL OF MOLECULAR BIOLOGY

Long-Range Effects and Functional Consequences of Stabilizing Mutations in the Ankyrin Repeat Domain of IκBα

(2012) Carla F. Cervantes et al.   JOURNAL OF MOLECULAR BIOLOGY

Protein frustratometer: a tool to localize energetic frustration in protein molecules

(2012) M. Jenik et al.   NUCLEIC ACIDS RESEARCH

Tandem repeats in proteins: From sequence to structure

(2011) Andrey V. Kajava   JOURNAL OF STRUCTURAL BIOLOGY

On the role of frustration in the energy landscapes of allosteric proteins

(2011) Diego U. Ferreiro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Contribution of Entropy, Enthalpy, and Hydrophobic Desolvation to Cooperativity in Repeat-Protein Folding

(2011) Tural Aksel et al.   STRUCTURE

Kinetic enhancement of NF- B{middle dot}DNA dissociation by I B 

(2009) S. Bergqvist et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A note on difficult structure alignment problems

(2008) M. J. Sippl et al.   BIOINFORMATICS

On distance and similarity in fold space

(2008) M. J. Sippl   BIOINFORMATICS

The capillarity picture and the kinetics of one-dimensional protein folding

(2008) D. U. Ferreiro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Shifting transition states in the unfolding of a large ankyrin repeat protein

(2008) N. D. Werbeck et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The IκBα/NF-κB complex has two hot spots, one at either end of the interface

(2008) Simon Bergqvist et al.   PROTEIN SCIENCE

The Energy Landscapes of Repeat-Containing Proteins: Topology, Cooperativity, and the Folding Funnels of One-Dimensional Architectures

(2008) Diego U. Ferreiro et al.   PLoS Computational Biology