Ground-state properties of the retinal molecule: from quantum mechanical to classical mechanical computations of retinal proteins

Structural Elements of the Signal Propagation Pathway in Squid Rhodopsin and Bovine Rhodopsin

(2011) Minoru Sugihara et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Amygdala circuitry mediating reversible and bidirectional control of anxiety

(2011) Kay M. Tye et al.   NATURE

Coupling of Retinal, Protein, and Water Dynamics in Squid Rhodopsin

(2010) Eduardo Jardón-Valadez et al.   BIOPHYSICAL JOURNAL

Polarization Effects Stabilize Bacteriorhodopsin’s Chromophore Binding Pocket: A Molecular Dynamics Study

(2009) G. Babitzki et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Functional and shunt states of bacteriorhodopsin resolved by 250 GHz dynamic nuclear polarization-enhanced solid-state NMR

(2009) V. S. Bajaj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanism of a proton pump analyzed with computer simulations

(2009) Ana-Nicoleta Bondar et al.   THEORETICAL CHEMISTRY ACCOUNTS

The energetics of the primary proton transfer in bacteriorhodopsin revisited: It is a sequential light-induced charge separation after all

(2008) Sonja Braun-Sand et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Spectral Signatures of the Pentagonal Water Cluster in Bacteriorhodopsin

(2008) Marcel Baer et al.   CHEMPHYSCHEM

Potential Proton-Release Channels in Bacteriorhodopsin

(2008) Alain Chaumont et al.   CHEMPHYSCHEM

Mechanism of Spectral Tuning Going from Retinal in Vacuo to Bovine Rhodopsin and its Mutants: Multireference ab Initio Quantum Mechanics/Molecular Mechanics Studies

(2008) Ahmet Altun et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Key Role of Active-Site Water Molecules in Bacteriorhodopsin Proton-Transfer Reactions

(2008) Ana-Nicoleta Bondar et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Crystal structure of squid rhodopsin

(2008) Midori Murakami et al.   NATURE