Efficient QTL detection of flowering date in a soybean RIL population using the novel restricted two-stage multi-locus GWAS procedure

Natural variation at the soybean J locus improves adaptation to the tropics and enhances yield

(2017) Sijia Lu et al.   NATURE GENETICS

Genetic Enhancer Analysis Reveals that FLORAL ORGAN NUMBER2 and OsMADS3 Co-operatively Regulate Maintenance and Determinacy of the Flower Meristem in Rice

(2017) Yukiko Yasui et al.   PLANT AND CELL PHYSIOLOGY

An innovative procedure of genome-wide association analysis fits studies on germplasm population and plant breeding

(2017) Jianbo He et al.   THEORETICAL AND APPLIED GENETICS

Detecting the QTL-allele system conferring flowering date in a nested association mapping population of soybean using a novel procedure

(2017) Shuguang Li et al.   THEORETICAL AND APPLIED GENETICS

A recessive allele for delayed flowering at the soybean maturity locus E9 is a leaky allele of FT2a, a FLOWERING LOCUS T ortholog

(2016) Chen Zhao et al.   BMC PLANT BIOLOGY

Establishment of a 100-seed weight quantitative trait locus–allele matrix of the germplasm population for optimal recombination design in soybean breeding programmes

(2015) Yinghu Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

(2015) Zhengkui Zhou et al.   NATURE BIOTECHNOLOGY

Marker-assisted breeding for transgressive seed protein content in soybean [Glycine max (L.) Merr.]

(2015) Ying Hu Zhang et al.   THEORETICAL AND APPLIED GENETICS

A New Dominant Gene Conditions Early Flowering and Maturity in Soybean

(2014) Fanjiang Kong et al.   CROP SCIENCE

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

The riceFISH BONEgene encodes a tryptophan aminotransferase, which affects pleiotropic auxin-related processes

(2014) Takanori Yoshikawa et al.   PLANT JOURNAL

Whole-genome QTL analysis for MAGIC

(2014) Arūnas P. Verbyla et al.   THEORETICAL AND APPLIED GENETICS

Gene networks controllingArabidopsis thalianaflower development

(2013) Diarmuid Seosamh Ó'Maoiléidigh et al.   NEW PHYTOLOGIST

Identification of QTLs for growth period traits in soybean using association analysis and linkage mapping

(2013) Qiaomei Zuo et al.   PLANT BREEDING

Identification of novel QTL for leaf traits in soybean

(2013) Tae-Hwan Jun et al.   PLANT BREEDING

Pinpointing genes underlying the quantitative trait loci for root-knot nematode resistance in palaeopolyploid soybean by whole genome resequencing

(2013) X. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

QTL mapping of stalk bending strength in a recombinant inbred line maize population

(2013) Haixiao Hu et al.   THEORETICAL AND APPLIED GENETICS

QTL affecting fitness of hybrids between wild and cultivated soybeans in experimental fields

(2013) Yosuke Kuroda et al.   Ecology and Evolution

A Lasso multi-marker mixed model for association mapping with population structure correction

(2012) Barbara Rakitsch et al.   BIOINFORMATICS

Genetic and molecular bases of photoperiod responses of flowering in soybean

(2012) Satoshi Watanabe et al.   BREEDING SCIENCE

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

(2012) Hui Li et al.   NATURE GENETICS

An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations

(2012) Vincent Segura et al.   NATURE GENETICS

Positional cloning and characterization reveal the molecular basis for soybean maturity locus E1 that regulates photoperiodic flowering

(2012) Z. Xia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Map-Based Cloning Strategy Employing a Residual Heterozygous Line Reveals that theGIGANTEAGene Is Involved in Soybean Maturity and Flowering

(2011) Satoshi Watanabe et al.   GENETICS

Emerging Knowledge from Genome Sequencing of Crop Species

(2011) Delfina Barabaschi et al.   MOLECULAR BIOTECHNOLOGY

Gene and QTL detection in a three-way barley cross under selection by a mixed model with kinship information using SNPs

(2011) Marcos Malosetti et al.   THEORETICAL AND APPLIED GENETICS

Statistical properties of QTL linkage mapping in biparental genetic populations

(2010) H Li et al.   HEREDITY

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

(2010) Susanna Atwell et al.   NATURE

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

The Soybean Stem Growth Habit Gene Dt1 Is an Ortholog of Arabidopsis TERMINAL FLOWER1

(2010) B. Liu et al.   PLANT PHYSIOLOGY

Two Coordinately Regulated Homologs of FLOWERING LOCUS T Are Involved in the Control of Photoperiodic Flowering in Soybean

(2010) F. Kong et al.   PLANT PHYSIOLOGY

Artificial selection for determinate growth habit in soybean

(2010) Z. Tian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing

(2010) W. Xie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mapping 49 quantitative trait loci at high resolution through sequencing-based genotyping of rice recombinant inbred lines

(2010) Lu Wang et al.   THEORETICAL AND APPLIED GENETICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Map-Based Cloning of the Gene Associated With the Soybean Maturity Locus E3

(2009) Satoshi Watanabe et al.   GENETICS

High-throughput genotyping by whole-genome resequencing

(2009) X. Huang et al.   GENOME RESEARCH

Fine-scale comparative genetic and physical mapping supports map-based cloning strategies for the self-incompatibility loci of perennial ryegrass (Lolium perenne L.)

(2009) Hiroshi Shinozuka et al.   PLANT MOLECULAR BIOLOGY

From ABC genes to regulatory networks, epigenetic landscapes and flower morphogenesis: Making biological sense of theoretical approaches

(2009) Elena R. Alvarez-Buylla et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

QTLNetwork: mapping and visualizing genetic architecture of complex traits in experimental populations

(2008) J. Yang et al.   BIOINFORMATICS

Genetic Redundancy in Soybean Photoresponses Associated With Duplication of the Phytochrome A Gene

(2008) B. Liu et al.   GENETICS