Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Authors
Keywords
Transposable Element, Minimum Free Energy, lncRNA Transcript, Canine Lymphoma, Candidate lncRNAs
Journal
Genome Medicine
Volume 7, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-10-27
DOI
10.1186/s13073-015-0230-7
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The landscape of long noncoding RNAs in the human transcriptome
- (2015) Matthew K Iyer et al. NATURE GENETICS
- Mongersen, an Oral SMAD7 Antisense Oligonucleotide, and Crohn’s Disease
- (2015) Giovanni Monteleone et al. NEW ENGLAND JOURNAL OF MEDICINE
- Man's best friend: what can pet dogs teach us about non-Hodgkin's lymphoma?
- (2014) Kristy L. Richards et al. IMMUNOLOGICAL REVIEWS
- Defining a personal, allele-specific, and single-molecule long-read transcriptome
- (2014) Hagen Tilgner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Enhancer RNAs and regulated transcriptional programs
- (2014) Michael T.Y. Lam et al. TRENDS IN BIOCHEMICAL SCIENCES
- The Long Non-Coding RNA PCAT-1 Promotes Prostate Cancer Cell Proliferation through cMyc
- (2014) John R. Prensner et al. NEOPLASIA
- EZH2 Is Required for Germinal Center Formation and Somatic EZH2 Mutations Promote Lymphoid Transformation
- (2013) Wendy Béguelin et al. CANCER CELL
- Discovery and Characterization of Super-Enhancer-Associated Dependencies in Diffuse Large B Cell Lymphoma
- (2013) Bjoern Chapuy et al. CANCER CELL
- CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
- (2013) Liguo Wang et al. NUCLEIC ACIDS RESEARCH
- The UCSC Genome Browser database: 2014 update
- (2013) Donna Karolchik et al. NUCLEIC ACIDS RESEARCH
- Comparative RNA-Seq and Microarray Analysis of Gene Expression Changes in B-Cell Lymphomas of Canis familiaris
- (2013) Marie Mooney et al. PLoS One
- Noncoding RNA and Polycomb recruitment
- (2013) N. Brockdorff RNA
- A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters
- (2013) Katerina Hatzi et al. Cell Reports
- STAT3 Targets Suggest Mechanisms of Aggressive Tumorigenesis in Diffuse Large B-Cell Lymphoma
- (2013) Jennifer Hardee et al. G3-Genes Genomes Genetics
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
- (2012) Pablo Cingolani et al. FLY
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- (2012) D. C. Koboldt et al. GENOME RESEARCH
- Non-coding RNAs and EZH2 interactions in cancer: Long and short tales from the transcriptome
- (2012) Leonidas Benetatos et al. INTERNATIONAL JOURNAL OF CANCER
- Intronic RNAs mediate EZH2 regulation of epigenetic targets
- (2012) Sònia Guil et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Transposable elements reveal a stem cell-specific class of long noncoding RNAs
- (2012) David Kelley et al. GENOME BIOLOGY
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3′ UTRs via Alu elements
- (2011) Chenguang Gong et al. NATURE
- Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression
- (2011) John R Prensner et al. NATURE BIOTECHNOLOGY
- Integrative genomics viewer
- (2011) James T Robinson et al. NATURE BIOTECHNOLOGY
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- EZH2-mediated epigenetic silencing in germinal center B cells contributes to proliferation and lymphomagenesis
- (2010) I. Velichutina et al. BLOOD
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
- (2010) Rajnish A. Gupta et al. NATURE
- GREAT improves functional interpretation of cis-regulatory regions
- (2010) Cory Y McLean et al. NATURE BIOTECHNOLOGY
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Somatic mutations altering EZH2 (Tyr641) in follicular and diffuse large B-cell lymphomas of germinal-center origin
- (2010) Ryan D Morin et al. NATURE GENETICS
- Oncogenic Activation of NF- B
- (2010) L. M. Staudt Cold Spring Harbor Perspectives in Biology
- Using Alu Elements as Polyadenylation Sites: A Case of Retroposon Exaptation
- (2008) C. Chen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Stromal Gene Signatures in Large-B-Cell Lymphomas
- (2008) G. Lenz et al. NEW ENGLAND JOURNAL OF MEDICINE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search