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Title
Modeling Read Counts for CNV Detection in Exome Sequencing Data
Authors
Keywords
-
Journal
Statistical Applications in Genetics and Molecular Biology
Volume 10, Issue 1, Pages -
Publisher
Walter de Gruyter GmbH
Online
2011-11-09
DOI
10.2202/1544-6115.1732
References
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Related references
Note: Only part of the references are listed.- Exome sequencing-based copy-number variation and loss of heterozygosity detection: ExomeCNV
- (2011) Jarupon Fah Sathirapongsasuti et al. BIOINFORMATICS
- Accurate and exact CNV identification from targeted high-throughput sequence data
- (2011) Alex S Nord et al. BMC GENOMICS
- Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations
- (2011) Brian J O'Roak et al. NATURE GENETICS
- ReadDepth: A Parallel R Package for Detecting Copy Number Alterations from Short Sequencing Reads
- (2011) Christopher A. Miller et al. PLoS One
- Comparison of Three Targeted Enrichment Strategies on the SOLiD Sequencing Platform
- (2011) Dale J. Hedges et al. PLoS One
- Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization
- (2010) Valentina Boeva et al. BIOINFORMATICS
- CNAseg—a novel framework for identification of copy number changes in cancer from second-generation sequencing data
- (2010) Sergii Ivakhno et al. BIOINFORMATICS
- Resequencing of 200 human exomes identifies an excess of low-frequency non-synonymous coding variants
- (2010) Yingrui Li et al. NATURE GENETICS
- Towards a comprehensive structural variation map of an individual human genome
- (2010) Andy W Pang et al. GENOME BIOLOGY
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- CNV-seq, a new method to detect copy number variation using high-throughput sequencing
- (2009) Chao Xie et al. BMC BIOINFORMATICS
- RazerS--fast read mapping with sensitivity control
- (2009) D. Weese et al. GENOME RESEARCH
- The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes
- (2009) K. D. Pruitt et al. GENOME RESEARCH
- Sensitive and accurate detection of copy number variants using read depth of coverage
- (2009) S. Yoon et al. GENOME RESEARCH
- Personalized copy number and segmental duplication maps using next-generation sequencing
- (2009) Can Alkan et al. NATURE GENETICS
- Computational methods for discovering structural variation with next-generation sequencing
- (2009) Paul Medvedev et al. NATURE METHODS
- Filter-based hybridization capture of subgenomes enables resequencing and copy-number detection
- (2009) Daniel S Herman et al. NATURE METHODS
- Evaluation of next generation sequencing platforms for population targeted sequencing studies
- (2009) Olivier Harismendy et al. GENOME BIOLOGY
- Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing
- (2008) Peter J Campbell et al. NATURE GENETICS
- High-resolution mapping of copy-number alterations with massively parallel sequencing
- (2008) Derek Y Chiang et al. NATURE METHODS
- Copy Number Variation and Schizophrenia
- (2008) D. St Clair SCHIZOPHRENIA BULLETIN
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