Polymer translocation: the first two decades and the recent diversification

Electrostatic correlations on the ionic selectivity of cylindrical membrane nanopores

(2014) Sahin Buyukdagli et al.   JOURNAL OF CHEMICAL PHYSICS

Polymer capture by α-hemolysin pore upon salt concentration gradient

(2014) Byoung-jin Jeon et al.   JOURNAL OF CHEMICAL PHYSICS

Evaluating the applicability of the Fokker-Planck equation in polymer translocation: A Brownian dynamics study

(2014) James M. Polson et al.   JOURNAL OF CHEMICAL PHYSICS

Effect of charge patterns along a solid-state nanopore on polyelectrolyte translocation

(2014) H. H. Katkar et al.   JOURNAL OF CHEMICAL PHYSICS

Hydrodynamic Slip on DNA Observed by Optical Tweezers-Controlled Translocation Experiments with Solid-State and Lipid-Coated Nanopores

(2014) Lukas Galla et al.   NANO LETTERS

Anomalous diffusion models and their properties: non-stationarity, non-ergodicity, and ageing at the centenary of single particle tracking

(2014) Ralf Metzler et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Dynamics of polymer ejection from capsid

(2014) R. P. Linna et al.   PHYSICAL REVIEW E

Biomolecule transport across biomembranes in the presence of crowding: Polymer translocation driven by concentration and disorder gradients

(2014) Hendrick W. de Haan et al.   PHYSICAL REVIEW E

Tight knots in proteins: can they block the mitochondrial pores?

(2013) Piotr Szymczak   BIOCHEMICAL SOCIETY TRANSACTIONS

How helix-coil transition influences translocation of a single-stranded DNA and kinetics of its fluctuation inside the channel

(2013) Kulveer Singh et al.   EPL

Influence of pore friction on the universal aspects of driven polymer translocation

(2013) T. Ikonen et al.   EPL

Polymer translocation dynamics in the quasi-static limit

(2013) James M. Polson et al.   JOURNAL OF CHEMICAL PHYSICS

Dynamics of polymer translocation through a nanopore induced by different sizes of crowding agents

(2013) Yuhao Chen et al.   JOURNAL OF CHEMICAL PHYSICS

Driven translocation of a semi-flexible chain through a nanopore: A Brownian dynamics simulation study in two dimensions

(2013) Ramesh Adhikari et al.   JOURNAL OF CHEMICAL PHYSICS

Herpes Virus Genome, The Pressure Is On

(2013) David W. Bauer et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Non-equilibrium folding of individual DNA molecules recaptured up to 1000 times in a solid state nanopore

(2013) Calin Plesa et al.   NANOTECHNOLOGY

Popping the cork: mechanisms of phage genome ejection

(2013) Ian J. Molineux et al.   NATURE REVIEWS MICROBIOLOGY

Opposite translocation of long and short oligomers through a nanopore

(2013) Sebastian Getfert et al.   PHYSICAL REVIEW E

Electrophoretic capture of a DNA chain into a nanopore

(2013) Payam Rowghanian et al.   PHYSICAL REVIEW E

Electrophoresis of a DNA coil near a nanopore

(2013) Payam Rowghanian et al.   PHYSICAL REVIEW E

Statistics of DNA Capture by a Solid-State Nanopore

(2013) Mirna Mihovilovic et al.   PHYSICAL REVIEW LETTERS

Translocation of “Rod-Coil” Polymers: Probing the Structure of Single Molecules within Nanopores

(2013) Hendrick W. de Haan et al.   PHYSICAL REVIEW LETTERS

Translocation dynamics of a semiflexible chain under a bias: Comparison with tension propagation theory

(2013) Aniket Bhattacharya   POLYMER SCIENCE SERIES C

Topological friction strongly affects viral DNA ejection

(2013) D. Marenduzzo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamics of polymer translocation into an anisotropic confinement

(2013) Kehong Zhang et al.   Soft Matter

Chain deformation in translocation phenomena

(2013) Farnoush Farahpour et al.   Soft Matter

DNA Origami Gatekeepers for Solid-State Nanopores

(2012) Ruoshan Wei et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Quantitative Analysis of the Nanopore Translocation Dynamics of Simple Structured Polynucleotides

(2012) Severin Schink et al.   BIOPHYSICAL JOURNAL

Erratum to: Dynamical diagram and scaling in polymer driven translocation

(2012) Takuya Saito et al.   EUROPEAN PHYSICAL JOURNAL E

Detection of miRNAs with a nanopore single-molecule counter

(2012) Li-Qun Gu et al.   EXPERT REVIEW OF MOLECULAR DIAGNOSTICS

Using an incremental mean first passage approach to explore the viscosity dependent dynamics of the unbiased translocation of a polymer through a nanopore

(2012) Hendrick W. de Haan et al.   JOURNAL OF CHEMICAL PHYSICS

Translocation of stiff polymers through a nanopore driven by binding particles

(2012) Wancheng Yu et al.   JOURNAL OF CHEMICAL PHYSICS

Dynamics of polymer translocation into a circular nanocontainer through a nanopore

(2012) Kehong Zhang et al.   JOURNAL OF CHEMICAL PHYSICS

Polymer translocation under time-dependent driving forces: Resonant activation induced by attractive polymer-pore interactions

(2012) Timo Ikonen et al.   JOURNAL OF CHEMICAL PHYSICS

Memory effects during the unbiased translocation of a polymer through a nanopore

(2012) Hendrick W. de Haan et al.   JOURNAL OF CHEMICAL PHYSICS

Influence of non-universal effects on dynamical scaling in driven polymer translocation

(2012) T. Ikonen et al.   JOURNAL OF CHEMICAL PHYSICS

Slowing down DNA Translocation through a Nanopore in Lithium Chloride

(2012) Stefan W. Kowalczyk et al.   NANO LETTERS

Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase

(2012) Elizabeth A Manrao et al.   NATURE BIOTECHNOLOGY

Process time distribution of driven polymer transport

(2012) Takuya Saito et al.   PHYSICAL REVIEW E

Forced translocation of a polymer: Dynamical scaling versus molecular dynamics simulation

(2012) J. L. A. Dubbeldam et al.   PHYSICAL REVIEW E

Unifying model of driven polymer translocation

(2012) T. Ikonen et al.   PHYSICAL REVIEW E

Topological Jamming of Spontaneously Knotted Polyelectrolyte Chains Driven Through a Nanopore

(2012) A. Rosa et al.   PHYSICAL REVIEW LETTERS

Anomalous Diffusion of Phospholipids and Cholesterols in a Lipid Bilayer and its Origins

(2012) Jae-Hyung Jeon et al.   PHYSICAL REVIEW LETTERS

Markovian description of unbiased polymer translocation

(2012) Felipe Mondaini et al.   PHYSICS LETTERS A

Nanopores: A journey towards DNA sequencing

(2012) Meni Wanunu   Physics of Life Reviews

Effects of dielectric mismatch and chain flexibility on the translocation barriers of charged macromolecules through solid state nanopores

(2012) Stefan Kesselheim et al.   Soft Matter

DNA Origami: The Art of Folding DNA

(2011) Barbara Saccà et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Dynamical diagram and scaling in polymer driven translocation

(2011) T. Saito et al.   EUROPEAN PHYSICAL JOURNAL E

The chain sucker: Translocation dynamics of a polymer chain into a long narrow channel driven by longitudinal flow

(2011) Kaifu Luo et al.   JOURNAL OF CHEMICAL PHYSICS

Monte Carlo simulation on polymer translocation in crowded environment

(2011) Wei-Ping Cao et al.   JOURNAL OF CHEMICAL PHYSICS

First passage time distribution of chaperone driven polymer translocation through a nanopore: Homopolymer and heteropolymer cases

(2011) Rouhollah Haji Abdolvahab et al.   JOURNAL OF CHEMICAL PHYSICS

Communication: Consistent picture of lateral subdiffusion in lipid bilayers: Molecular dynamics simulation and exact results

(2011) Gerald R. Kneller et al.   JOURNAL OF CHEMICAL PHYSICS

Force-Driven Polymer Translocation through a Nanopore: An Old Problem Revisited

(2011) Payam Rowghanian et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Chaperone-Assisted Translocation of a Polymer through a Nanopore

(2011) Wancheng Yu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Controlling molecular transport through nanopores

(2011) U. F. Keyser   Journal of the Royal Society Interface

DNA Origami Nanopores

(2011) Nicholas A. W. Bell et al.   NANO LETTERS

Nanopore sensors for nucleic acid analysis

(2011) Bala Murali Venkatesan et al.   Nature Nanotechnology

Controlling protein translocation through nanopores with bio-inspired fluid walls

(2011) Erik C. Yusko et al.   Nature Nanotechnology

Single particle tracking in systems showing anomalous diffusion: the role of weak ergodicity breaking

(2011) Stas Burov et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Polymer translocation induced by a bad solvent

(2011) Christopher Lörscher et al.   PHYSICAL REVIEW E

Sequence dependence of the binding energy in chaperone-driven polymer translocation through a nanopore

(2011) Rouhollah Haji Abdolvahab et al.   PHYSICAL REVIEW E

Fractional Brownian motion approach to polymer translocation: The governing equation of motion

(2011) J. L. A. Dubbeldam et al.   PHYSICAL REVIEW E

Translocation of DNA Molecules through Nanopores with Salt Gradients: The Role of Osmotic Flow

(2011) Marius M. Hatlo et al.   PHYSICAL REVIEW LETTERS

In VivoAnomalous Diffusion and Weak Ergodicity Breaking of Lipid Granules

(2011) Jae-Hyung Jeon et al.   PHYSICAL REVIEW LETTERS

Ejection dynamics of a ring polymer out of a nanochannel

(2011) Junfang Sheng et al.   Soft Matter

DNA Sensing Using Nanocrystalline Surface-Enhanced Al2O3Nanopore Sensors

(2010) Bala Murali Venkatesan et al.   ADVANCED FUNCTIONAL MATERIALS

Applications of biological pores in nanomedicine, sensing, and nanoelectronics

(2010) Sheereen Majd et al.   CURRENT OPINION IN BIOTECHNOLOGY

Driven polymer translocation through nanopores: Slow-vs.-fast dynamics

(2010) K. Luo et al.   EPL

Polymer translocation through a nanopore: The effect of solvent conditions

(2010) Felix Kapahnke et al.   JOURNAL OF CHEMICAL PHYSICS

Polymer translocation into laterally unbounded confined environments

(2010) Kaifu Luo et al.   JOURNAL OF CHEMICAL PHYSICS

Simulations of two-dimensional unbiased polymer translocation using the bond fluctuation model

(2010) Debabrata Panja et al.   JOURNAL OF CHEMICAL PHYSICS

DNA capture into a nanopore: Interplay of diffusion and electrohydrodynamics

(2010) Alexander Y. Grosberg et al.   JOURNAL OF CHEMICAL PHYSICS

Theory of capture rate in polymer translocation

(2010) M. Muthukumar   JOURNAL OF CHEMICAL PHYSICS

Detecting DNA Folding with Nanocapillaries

(2010) Lorenz J. Steinbock et al.   NANO LETTERS

DNA Translocation through Graphene Nanopores

(2010) Christopher A. Merchant et al.   NANO LETTERS

DNA Translocation through Graphene Nanopores

(2010) Grégory F. Schneider et al.   NANO LETTERS

Optical Recognition of Converted DNA Nucleotides for Single-Molecule DNA Sequencing Using Nanopore Arrays

(2010) Ben McNally et al.   NANO LETTERS

Deciphering ionic current signatures of DNA transport through a nanopore

(2010) Aleksei Aksimentiev   Nanoscale

Graphene as a subnanometre trans-electrode membrane

(2010) S. Garaj et al.   NATURE

Hybrid pore formation by directed insertion of α-haemolysin into solid-state nanopores

(2010) Adam R. Hall et al.   Nature Nanotechnology

Mapping the variation of the translocationαscaling exponent with nanopore width

(2010) Hendrick W. de Haan et al.   PHYSICAL REVIEW E

Polymer translocation into a fluidic channel through a nanopore

(2010) Kaifu Luo et al.   PHYSICAL REVIEW E

First-passage distributions in a collective model of anomalous diffusion with tunable exponent

(2010) Assaf Amitai et al.   PHYSICAL REVIEW E

Unforced polymer translocation compared to the forced case

(2010) V. V. Lehtola et al.   PHYSICAL REVIEW E

Sucking genes into pores: Insight into driven translocation

(2010) Takahiro Sakaue   PHYSICAL REVIEW E

Nanopore DNA sequencing with MspA

(2010) I. M. Derrington et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Highly Sensitive, Mechanically Stable Nanopore Sensors for DNA Analysis

(2009) Bala Murali Venkatesan et al.   ADVANCED MATERIALS

Dynamics of forced biopolymer translocation

(2009) V. V. Lehtola et al.   EPL

Scaling exponents of forced polymer translocation through a nanopore

(2009) A. Bhattacharya et al.   EUROPEAN PHYSICAL JOURNAL E

Polymer translocation in a double-force arrangement

(2009) S. T. T. Ollila et al.   EUROPEAN PHYSICAL JOURNAL E

Ionic Field Effect Transistors with Sub-10 nm Multiple Nanopores

(2009) Sung-Wook Nam et al.   NANO LETTERS

DNA origami: Fold, stick, and beyond

(2009) Akinori Kuzuya et al.   Nanoscale

Reverse DNA translocation through a solid-state nanopore by magnetic tweezers

(2009) Hongbo Peng et al.   NANOTECHNOLOGY

Translocation of double-stranded DNA through membrane-adapted phi29 motor protein nanopores

(2009) David Wendell et al.   Nature Nanotechnology

Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient

(2009) Meni Wanunu et al.   Nature Nanotechnology

Nondriven polymer translocation through a nanopore: Computational evidence that the escape and relaxation processes are coupled

(2009) Michel G. Gauthier et al.   PHYSICAL REVIEW E

Response of single polymers to localized step strains

(2009) Debabrata Panja   PHYSICAL REVIEW E

Polymer translocation out of confined environments

(2009) Kaifu Luo et al.   PHYSICAL REVIEW E

Probing Surface Charge Fluctuations with Solid-State Nanopores

(2009) David P. Hoogerheide et al.   PHYSICAL REVIEW LETTERS

Flow injection of polymers into nanopores

(2009) A. P. Markesteijn et al.   Soft Matter

Interrogating single proteins through nanopores: challenges and opportunities

(2009) Liviu Movileanu   TRENDS IN BIOTECHNOLOGY

Effect of screening on the transport of polyelectrolytes through nanopores

(2008) G. Oukhaled et al.   EPL

Molecular Dynamics simulation of a polymer chain translocating through a nanoscopic pore

(2008) M. G. Gauthier et al.   EUROPEAN PHYSICAL JOURNAL E

Sequence effects on the forced translocation of heteropolymers through a small channel

(2008) Michel G. Gauthier et al.   JOURNAL OF CHEMICAL PHYSICS

A Monte Carlo algorithm to study polymer translocation through nanopores. I. Theory and numerical approach

(2008) Michel G. Gauthier et al.   JOURNAL OF CHEMICAL PHYSICS

A Monte Carlo algorithm to study polymer translocation through nanopores. II. Scaling laws

(2008) Michel G. Gauthier et al.   JOURNAL OF CHEMICAL PHYSICS

Analytical and numerical studies of sequence dependence of passage times for translocation of heterobiopolymers through nanopores

(2008) R. H. Abdolvahab et al.   JOURNAL OF CHEMICAL PHYSICS

The effect of hydrodynamic interactions on the dynamics of DNA translocation through pores

(2008) Aslin Izmitli et al.   JOURNAL OF CHEMICAL PHYSICS

Osmotic Pressure: Resisting or Promoting DNA Ejection from Phage?

(2008) Meerim Jeembaeva et al.   JOURNAL OF MOLECULAR BIOLOGY

The potential and challenges of nanopore sequencing

(2008) Daniel Branton et al.   NATURE BIOTECHNOLOGY

Probability distributions for polymer translocation

(2008) Clément Chatelain et al.   PHYSICAL REVIEW E

Critical evaluation of the computational methods used in the forced polymer translocation

(2008) V. V. Lehtola et al.   PHYSICAL REVIEW E

Electro-osmotic screening of the DNA charge in a nanopore

(2008) Binquan Luan et al.   PHYSICAL REVIEW E

Hydrodynamic correlations in the translocation of a biopolymer through a nanopore: Theory and multiscale simulations

(2008) Maria Fyta et al.   PHYSICAL REVIEW E

Dynamical scaling exponents for polymer translocation through a nanopore

(2008) Kaifu Luo et al.   PHYSICAL REVIEW E

Sequence Dependence of DNA Translocation through a Nanopore

(2008) Kaifu Luo et al.   PHYSICAL REVIEW LETTERS

Dynamics of Polyelectrolyte Transport through a Protein Channel as a Function of Applied Voltage

(2008) L. Brun et al.   PHYSICAL REVIEW LETTERS

Single-molecule DNA detection with an engineered MspA protein nanopore

(2008) T. Z. Butler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Squeezing a single polypeptide through a nanopore

(2008) Liviu Movileanu   Soft Matter

Passage Times for Polymer Translocation Pulled through a Narrow Pore

(2007) Debabrata Panja et al.   BIOPHYSICAL JOURNAL