Continuum- and particle-based modeling of shapes and dynamics of red blood cells in health and disease

Quantifying the Rheological and Hemodynamic Characteristics of Sickle Cell Anemia

(2012) Huan Lei et al.   BIOPHYSICAL JOURNAL

Effect of Chain Chirality on the Self-Assembly of Sickle Hemoglobin

(2012) Xuejin Li et al.   BIOPHYSICAL JOURNAL

How Malaria Parasites Reduce the Deformability of Infected Red Blood Cells

(2012) S. Majid Hosseini et al.   BIOPHYSICAL JOURNAL

Modeling sickle hemoglobin fibers as one chain of coarse-grained particles

(2012) He Li et al.   JOURNAL OF BIOMECHANICS

Comparison between advected-field and level-set methods in the study of vesicle dynamics

(2012) E. Maitre et al.   PHYSICA D-NONLINEAR PHENOMENA

Blood–plasma separation in Y-shaped bifurcating microfluidic channels: a dissipative particle dynamics simulation study

(2012) Xuejin Li et al.   PHYSICAL BIOLOGY

Characteristic spatial scale of vesicle pair interactions in a plane linear flow

(2012) Michael Levant et al.   PHYSICAL REVIEW E

Shape Diagram of Vesicles in Poiseuille Flow

(2012) Gwennou Coupier et al.   PHYSICAL REVIEW LETTERS

Shear-induced particle migration and margination in a cellular suspension

(2012) Hong Zhao et al.   PHYSICS OF FLUIDS

Vesicle tumbling inhibited by inertia

(2012) Aymen Laadhari et al.   PHYSICS OF FLUIDS

Predicting the morphology of sickle red blood cells using coarse-grained models of intracellular aligned hemoglobin polymers

(2012) Huan Lei et al.   Soft Matter

Wall Shear Stress-Based Model for Adhesive Dynamics of Red Blood Cells in Malaria

(2011) Dmitry A. Fedosov et al.   BIOPHYSICAL JOURNAL

Red blood cell dynamics: from cell deformation to ATP release

(2011) Jiandi Wan et al.   Integrative Biology

Coupling the lattice-Boltzmann and spectrin-link methods for the direct numerical simulation of cellular blood flow

(2011) Daniel A. Reasor et al.   INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN FLUIDS

Motion of near-spherical micro-capsule in planar external flow

(2011) S. S. Vergeles et al.   JETP LETTERS

Margination of red blood cells infected by Plasmodium falciparum in a microvessel

(2011) Yohsuke Imai et al.   JOURNAL OF BIOMECHANICS

A level set projection model of lipid vesicles in general flows

(2011) D. Salac et al.   JOURNAL OF COMPUTATIONAL PHYSICS

A fast algorithm for simulating vesicle flows in three dimensions

(2011) Shravan K. Veerapaneni et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Stochastic Eulerian Lagrangian methods for fluid–structure interactions with thermal fluctuations

(2011) Paul J. Atzberger   JOURNAL OF COMPUTATIONAL PHYSICS

Settling of a vesicle in the limit of quasispherical shapes

(2011) G. Boedec et al.   JOURNAL OF FLUID MECHANICS

Dynamics of a non-spherical microcapsule with incompressible interface in shear flow

(2011) P. M. VLAHOVSKA et al.   JOURNAL OF FLUID MECHANICS

Multiscale modelling of erythrocytes in Stokes flow

(2011) Zhangli Peng et al.   JOURNAL OF FLUID MECHANICS

A microfabricated deformability-based flow cytometer with application to malaria

(2011) Hansen Bow et al.   LAB ON A CHIP

A Model for Red Blood Cells in Simulations of Large-scale Blood Flows

(2011) Simone Melchionna   MACROMOLECULAR THEORY AND SIMULATIONS

Predicting dynamics and rheology of blood flow: A comparative study of multiscale and low-dimensional models of red blood cells

(2011) Wenxiao Pan et al.   MICROVASCULAR RESEARCH

Rotational behaviour of red blood cells in suspension: a mesoscale simulation study

(2011) F. Janoschek et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Phase diagram and breathing dynamics of a single red blood cell and a biconcave capsule in dilute shear flow

(2011) Alireza Z. K. Yazdani et al.   PHYSICAL REVIEW E

Comment on “Tank-treading and tumbling frequencies of capsules and red blood cells”

(2011) P. Dimitrakopoulos   PHYSICAL REVIEW E

Vesicle electrohydrodynamics

(2011) Jonathan T. Schwalbe et al.   PHYSICAL REVIEW E

Two-dimensional vesicle dynamics under shear flow: Effect of confinement

(2011) Badr Kaoui et al.   PHYSICAL REVIEW E

Symmetry breaking of vesicle shapes in Poiseuille flow

(2011) Alexander Farutin et al.   PHYSICAL REVIEW E

Complexity of vesicle microcirculation

(2011) B. Kaoui et al.   PHYSICAL REVIEW E

Tank-treading and tumbling frequencies of capsules and red blood cells

(2011) Alireza Z. K. Yazdani et al.   PHYSICAL REVIEW E

Three-dimensional vesicles under shear flow: Numerical study of dynamics and phase diagram

(2011) Thierry Biben et al.   PHYSICAL REVIEW E

Vesicle Migration and Spatial Organization Driven by Flow Line Curvature

(2011) Giovanni Ghigliotti et al.   PHYSICAL REVIEW LETTERS

Dynamics of vesicles in shear and rotational flows: Modal dynamics and phase diagram

(2011) Norman J. Zabusky et al.   PHYSICS OF FLUIDS

The dynamics of a vesicle in a wall-bound shear flow

(2011) Hong Zhao et al.   PHYSICS OF FLUIDS

Predicting human blood viscosity in silico

(2011) D. A. Fedosov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiscale approach to link red blood cell dynamics, shear viscosity, and ATP release

(2011) A. M. Forsyth et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Continuum simulations of biomembrane dynamics and the importance of hydrodynamic effects

(2011) Frank L. H. Brown   QUARTERLY REVIEWS OF BIOPHYSICS

Minimum-energy vesicle and cell shapes calculated using spherical harmonics parameterization

(2011) Khaled Khairy et al.   Soft Matter

Deformation and clustering of red blood cells in microcapillary flows

(2011) J. Liam McWhirter et al.   Soft Matter

Multiscale Modeling of Red Blood Cell Mechanics and Blood Flow in Malaria

(2011) Dmitry A. Fedosov et al.   PLoS Computational Biology

Particle-Based Methods for Multiscale Modeling of Blood Flow in the Circulation and in Devices: Challenges and Future Directions

(2010) Takami Yamaguchi et al.   ANNALS OF BIOMEDICAL ENGINEERING

Sickle Cell Biomechanics

(2010) Gilda A. Barabino et al.   Annual Review of Biomedical Engineering

A Multiscale Red Blood Cell Model with Accurate Mechanics, Rheology, and Dynamics

(2010) Dmitry A. Fedosov et al.   BIOPHYSICAL JOURNAL

Tank-Treading of Erythrocytes in Strong Shear Flows via a Nonstiff Cytoskeleton-Based Continuum Computational Modeling

(2010) W.R. Dodson et al.   BIOPHYSICAL JOURNAL

Modeling the motion of capsules in flow

(2010) Dominique Barthès-Biesel   CURRENT OPINION IN COLLOID & INTERFACE SCIENCE

Modeling of hemodynamics arising from malaria infection

(2010) Yohsuke Imai et al.   JOURNAL OF BIOMECHANICS

Dynamic simulation of locally inextensible vesicles suspended in an arbitrary two-dimensional domain, a boundary integral method

(2010) Abtin Rahimian et al.   JOURNAL OF COMPUTATIONAL PHYSICS

A spectral boundary integral method for flowing blood cells

(2010) Hong Zhao et al.   JOURNAL OF COMPUTATIONAL PHYSICS

3D vesicle dynamics simulations with a linearly triangulated surface

(2010) G. Boedec et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Monolayer slip effects on the dynamics of a lipid bilayer vesicle in a viscous flow

(2010) JONATHAN T. SCHWALBE et al.   JOURNAL OF FLUID MECHANICS

A coarse-grain molecular dynamics model for sickle hemoglobin fibers

(2010) He Li et al.   Journal of the Mechanical Behavior of Biomedical Materials

Blood Flow and Cell-Free Layer in Microvessels

(2010) DMITRY A. FEDOSOV et al.   MICROCIRCULATION

Analytical progress in the theory of vesicles under linear flow

(2010) Alexander Farutin et al.   PHYSICAL REVIEW E

Simplified particulate model for coarse-grained hemodynamics simulations

(2010) F. Janoschek et al.   PHYSICAL REVIEW E

Multiscale simulation of erythrocyte membranes

(2010) Zhangli Peng et al.   PHYSICAL REVIEW E

Chaotic Dynamics of Red Blood Cells in a Sinusoidal Flow

(2010) Jules Dupire et al.   PHYSICAL REVIEW LETTERS

Quantifying the biophysical characteristics of Plasmodium-falciparum-parasitized red blood cells in microcirculation

(2010) D. A. Fedosov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic remodeling of the human red blood cell membrane

(2010) Y. Park et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A low-dimensional model for the red blood cell

(2010) Wenxiao Pan et al.   Soft Matter

Red blood cell dynamics: from spontaneous fluctuations to non-linear response

(2010) Young Zoon Yoon et al.   Soft Matter

Lattice-Boltzmann Method for Complex Flows

(2009) Cyrus K. Aidun et al.   Annual Review of Fluid Mechanics

A particle-based model for the transport of erythrocytes in capillaries

(2009) S. Majid Hosseini et al.   CHEMICAL ENGINEERING SCIENCE

Vesicles and red blood cells in flow: From individual dynamics to rheology

(2009) Petia M. Vlahovska et al.   COMPTES RENDUS PHYSIQUE

Microconfined flow behavior of red blood cells in vitro

(2009) Stefano Guido et al.   COMPTES RENDUS PHYSIQUE

Capsule motion in flow: Deformation and membrane buckling

(2009) Dominique Barthès-Biesel   COMPTES RENDUS PHYSIQUE

Elastic capsules in shear flow: Analytical solutions for constant and time-dependent shear rates

(2009) S. Kessler et al.   EUROPEAN PHYSICAL JOURNAL E

A numerical method for simulating the dynamics of 3D axisymmetric vesicles suspended in viscous flows

(2009) Shravan K. Veerapaneni et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Dynamics of multicomponent vesicles in a viscous fluid

(2009) Jin Sun Sohn et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Swinging and synchronized rotations of red blood cells in simple shear flow

(2009) Hiroshi Noguchi   PHYSICAL REVIEW E

Vesicles under simple shear flow: Elucidating the role of relevant control parameters

(2009) Badr Kaoui et al.   PHYSICAL REVIEW E

Dynamics of nonspherical capsules in shear flow

(2009) Prosenjit Bagchi et al.   PHYSICAL REVIEW E

Why Do Red Blood Cells Have Asymmetric Shapes Even in a Symmetric Flow?

(2009) Badr Kaoui et al.   PHYSICAL REVIEW LETTERS

Phase Diagram of Single Vesicle Dynamical States in Shear Flow

(2009) J. Deschamps et al.   PHYSICAL REVIEW LETTERS

ATP-dependent mechanics of red blood cells

(2009) T. Betz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Flow-induced clustering and alignment of vesicles and red blood cells in microcapillaries

(2009) J. L. McWhirter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Red blood cell thermal fluctuations: comparison between experiment and molecular dynamics simulations

(2009) John P. Hale et al.   Soft Matter

Red blood cell deformation in microconfined flow

(2009) Giovanna Tomaiuolo et al.   Soft Matter

Cellular-scale hydrodynamics

(2008) Manouk Abkarian et al.   Biomedical Materials

Micro-Macro Link in Rheology of Erythrocyte and Vesicle Suspensions

(2008) Victoria Vitkova et al.   BIOPHYSICAL JOURNAL

Shapes of Red Blood Cells: Comparison of 3D Confocal Images with the Bilayer-Couple Model

(2008) Khaled Khairy et al.   Cellular and Molecular Bioengineering

Cytoskeleton mediated effective elastic properties of model red blood cell membranes

(2008) Rui Zhang et al.   JOURNAL OF CHEMICAL PHYSICS

Swinging and tumbling of elastic capsules in shear flow

(2008) S. KESSLER et al.   JOURNAL OF FLUID MECHANICS

Simulating deformable particle suspensions using a coupled lattice-Boltzmann and finite-element method

(2008) ROBERT M. MacMECCAN et al.   JOURNAL OF FLUID MECHANICS

Nearly spherical vesicles in an external flow

(2008) V V Lebedev et al.   NEW JOURNAL OF PHYSICS

Accurate Coarse-Grained Modeling of Red Blood Cells

(2008) Igor V. Pivkin et al.   PHYSICAL REVIEW LETTERS

Dynamic motion of red blood cells in simple shear flow

(2008) Y. Sui et al.   PHYSICS OF FLUIDS

Vesicles and red blood cells in shear flow

(2008) Manouk Abkarian et al.   Soft Matter