Genome-wide expression analysis offers new insights into the origin and evolution of Physcomitrella patens stress response
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Genome-wide expression analysis offers new insights into the origin and evolution of
Physcomitrella patens stress response
Authors
Keywords
-
Journal
Scientific Reports
Volume 5, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-11-30
DOI
10.1038/srep17434
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Insights from the cold transcriptome ofPhyscomitrella patens: global specialization pattern of conserved transcriptional regulators and identification of orphan genes involved in cold acclimation
- (2014) Anna K. Beike et al. NEW PHYTOLOGIST
- Transgenic Arabidopsis Flowers Overexpressing Acyl-CoA-Binding Protein ACBP6 are Freezing Tolerant
- (2014) Pan Liao et al. PLANT AND CELL PHYSIOLOGY
- The Ubiquitous Distribution of Late Embryogenesis Abundant Proteins across Cell Compartments inArabidopsisOffers Tailored Protection against Abiotic Stress
- (2014) Adrien Candat et al. PLANT CELL
- Coming of age: orphan genes in plants
- (2014) Zebulun W. Arendsee et al. TRENDS IN PLANT SCIENCE
- Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions
- (2013) Andreas D Zimmer et al. BMC GENOMICS
- The moss Physcomitrella patens: methods and tools from cultivation to targeted analysis of gene function
- (2013) Christoph Strotbek et al. INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY
- Differential analysis of gene regulation at transcript resolution with RNA-seq
- (2012) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Proportion statistics to detect differentially expressed genes: a comparison with log-ratio statistics
- (2011) Tracy L Bergemann et al. BMC BIOINFORMATICS
- g:Profiler—a web server for functional interpretation of gene lists (2011 update)
- (2011) Jüri Reimand et al. NUCLEIC ACIDS RESEARCH
- A soybean β-expansin gene GmEXPB2 intrinsically involved in root system architecture responses to abiotic stresses
- (2011) Wenbing Guo et al. PLANT JOURNAL
- DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis
- (2009) Tomokazu Tsutsui et al. JOURNAL OF PLANT RESEARCH
- Microarray analysis of the moss Physcomitrella patens reveals evolutionarily conserved transcriptional regulation of salt stress and abscisic acid signalling
- (2009) Sandra Richardt et al. PLANT MOLECULAR BIOLOGY
- Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses
- (2009) K. Nakashima et al. PLANT PHYSIOLOGY
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
- (2008) J. C. Marioni et al. GENOME RESEARCH
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms
- (2008) Peter A. C. 't Hoen et al. NUCLEIC ACIDS RESEARCH
- A PIIB-type Ca2+-ATPase is essential for stress adaptation in Physcomitrella patens
- (2008) E. Qudeimat et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started