Clustering methods differ in their ability to detect patterns in ecological networks

Evolutionary History and Ecological Processes Shape a Local Multilevel Antagonistic Network

(2013) Marianne Elias et al.   CURRENT BIOLOGY

MODULAR: software for the autonomous computation of modularity in large network sets

(2013) Flavia Maria Darcie Marquitti et al.   ECOGRAPHY

A method for detecting modules in quantitative bipartite networks

(2013) Carsten F. Dormann et al.   Methods in Ecology and Evolution

Phylogenetic Signal in Module Composition and Species Connectivity in Compartmentalized Host-Parasite Networks

(2012) Boris R. Krasnov et al.   AMERICAN NATURALIST

Identifying compartments in presence-absence matrices and bipartite networks: insights into modularity measures

(2012) Elisa Thébault   JOURNAL OF BIOGEOGRAPHY

Spectral clustering and the high-dimensional stochastic blockmodel

(2011) Karl Rohe et al.   ANNALS OF STATISTICS

Compartmentalization increases food-web persistence

(2011) Daniel B. Stouffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Uncovering latent structure in valued graphs: A variational approach

(2010) Mahendra Mariadassou et al.   Annals of Applied Statistics

An experimental test of a fundamental food web motif

(2010) J. M. K. Rip et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Stability of Ecological Communities and the Architecture of Mutualistic and Trophic Networks

(2010) E. Thebault et al.   SCIENCE

Food web models: a plea for groups

(2009) Stefano Allesina et al.   ECOLOGY LETTERS

Compartments in a marine food web associated with phylogeny, body mass, and habitat structure

(2009) Enrico L. Rezende et al.   ECOLOGY LETTERS

Community detection in graphs

(2009) Santo Fortunato   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Architecture of an Antagonistic Tree/Fungus Network: The Asymmetric Influence of Past Evolutionary History

(2008) Corinne Vacher et al.   PLoS One