The CHEMDNER corpus of chemicals and drugs and its annotation principles

Annotated Chemical Patent Corpus: A Gold Standard for Text Mining

(2014) Saber A. Akhondi et al.   PLoS One

The DDI corpus: An annotated corpus with pharmacological substances and drug–drug interactions

(2013) María Herrero-Zazo et al.   JOURNAL OF BIOMEDICAL INFORMATICS

MyMiner: a web application for computer-assisted biocuration and text annotation

(2012) David Salgado et al.   BIOINFORMATICS

Training text chunkers on a silver standard corpus: can silver replace gold?

(2012) Ning Kang et al.   BMC BIOINFORMATICS

Concept annotation in the CRAFT corpus

(2012) Michael Bada et al.   BMC BIOINFORMATICS

The EU-ADR corpus: Annotated drugs, diseases, targets, and their relationships

(2012) Erik M. van Mulligen et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Automated annotation of chemical names in the literature with tunable accuracy

(2011) Jun D Zhang et al.   Journal of Cheminformatics

ChemicalTagger: A tool for semantic text-mining in chemistry

(2011) Lezan Hawizy et al.   Journal of Cheminformatics

LINNAEUS: A species name identification system for biomedical literature

(2010) Martin Gerner et al.   BMC BIOINFORMATICS

Mining metabolites: extracting the yeast metabolome from the literature

(2010) Chikashi Nobata et al.   Metabolomics

PPI Finder: A Mining Tool for Human Protein-Protein Interactions

(2009) Min He et al.   PLoS One

Cascaded classifiers for confidence-based chemical named entity recognition

(2008) Peter Corbett et al.   BMC BIOINFORMATICS

Introducing meta-services for biomedical information extraction

(2008) Florian Leitner et al.   GENOME BIOLOGY

Overview of BioCreative II gene mention recognition

(2008) Larry Smith et al.   GENOME BIOLOGY

Linking genes to literature: text mining, information extraction, and retrieval applications for biology

(2008) Martin Krallinger et al.   GENOME BIOLOGY