MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution
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Title
MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution
Authors
Keywords
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Journal
Database-The Journal of Biological Databases and Curation
Volume 2015, Issue -, Pages bav080
Publisher
Oxford University Press (OUP)
Online
2015-08-19
DOI
10.1093/database/bav080
References
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Related references
Note: Only part of the references are listed.- Genomic Makeup of the Marine Flavobacterium Nonlabens (Donghaeana) dokdonensis and Identification of a Novel Class of Rhodopsins
- (2013) Soon-Kyeong Kwon et al. Genome Biology and Evolution
- PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
- (2013) Nicolas Lartillot et al. SYSTEMATIC BIOLOGY
- Bacterial, archaeal and viral-like rhodopsins from the Red Sea
- (2013) Alon Philosof et al. Environmental Microbiology Reports
- Proteorhodopsin genes in giant viruses
- (2012) Natalya Yutin et al. Biology Direct
- Global abundance of microbial rhodopsins
- (2012) Omri M Finkel et al. ISME Journal
- Microbial rhodopsins on leaf surfaces of terrestrial plants
- (2011) Nof Atamna-Ismaeel et al. ENVIRONMENTAL MICROBIOLOGY
- Constitutive Expression of the Proteorhodopsin Gene by a Flavobacterium Strain Representative of the Proteorhodopsin-Producing Microbial Community in the North Sea
- (2010) T. Riedel et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Proteorhodopsin-Bearing Bacteria in Antarctic Sea Ice
- (2010) E. Y. Koh et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
- (2010) Frederick A Matsen et al. BMC BIOINFORMATICS
- Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
- (2010) Jeremy Goecks et al. GENOME BIOLOGY
- Photoheterotrophic Microbes in the Arctic Ocean in Summer and Winter
- (2009) M. T. Cottrell et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- phyloXML: XML for evolutionary biology and comparative genomics
- (2009) Mira V Han et al. BMC BIOINFORMATICS
- Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria
- (2009) Adrian K Sharma et al. ISME Journal
- Actinorhodopsins: proteorhodopsin-like gene sequences found predominantly in non-marine environments
- (2008) Adrian K. Sharma et al. ENVIRONMENTAL MICROBIOLOGY
- Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems
- (2008) Nof Atamna-Ismaeel et al. ISME Journal
- Proteorhodopsins: an array of physiological roles?
- (2008) Jed A. Fuhrman et al. NATURE REVIEWS MICROBIOLOGY
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