A new way to see RNA

Structural analysis ofPneumocystis cariniiand human DHFR complexes with NADPH and a series of five potent 6-[5′-(ω-carboxyalkoxy)benzyl]pyrido[2,3-d]pyrimidine derivatives

(2010) Vivian Cody et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

iPARTS: an improved tool of pairwise alignment of RNA tertiary structures

(2010) Chih-Wei Wang et al.   NUCLEIC ACIDS RESEARCH

Semiautomated model building for RNA crystallography using a directed rotameric approach

(2010) K. S. Keating et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PROMOTIF-A program to identify and analyze structural motifs in proteins

(2010) E. Gail Hutchinson et al.   PROTEIN SCIENCE

Predicting loop-helix tertiary structural contacts in RNA pseudoknots

(2010) S. Cao et al.   RNA

Identification of dynamical hinge points of the L1 ligase molecular switch

(2010) G. M. Giambasu et al.   RNA

Knowledge-based instantiation of full atomic detail into coarse-grain RNA 3D structural models

(2009) Magdalena A. Jonikas et al.   BIOINFORMATICS

A structural analysis of the group II intron active site and implications for the spliceosome

(2009) K. S. Keating et al.   RNA

Coarse-grained modeling of large RNA molecules with knowledge-based potentials and structural filters

(2009) M. A. Jonikas et al.   RNA

Salt Dependence of Nucleic Acid Hairpin Stability

(2008) Zhi-Jie Tan et al.   BIOPHYSICAL JOURNAL

The GANC Tetraloop: A Novel Motif in the Group IIC Intron Structure

(2008) Kevin S. Keating et al.   JOURNAL OF MOLECULAR BIOLOGY

The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data

(2008) Marc Parisien et al.   NATURE

RNA backbone: Consensus all-angle conformers and modular string nomenclature (an RNA Ontology Consortium contribution)

(2008) J. S. Richardson et al.   RNA

Ab initio RNA folding by discrete molecular dynamics: From structure prediction to folding mechanisms

(2008) F. Ding et al.   RNA