Breast cancer biomarker measurements and standards

Impact of warm ischemia on gene expression analysis in surgically removed biosamples

(2012) Yi Ma et al.   ANALYTICAL BIOCHEMISTRY

Precision of Multiple Reaction Monitoring Mass Spectrometry Analysis of Formalin-Fixed, Paraffin-Embedded Tissue

(2012) Robert W. Sprung et al.   JOURNAL OF PROTEOME RESEARCH

Comprehensive molecular portraits of human breast tumours

(2012) Daniel C. Koboldt et al.   NATURE

Multiplexed quantification of estrogen receptor and HER2/Neu in tissue and cell lysates by peptide immunoaffinity enrichment mass spectrometry

(2012) Regine M. Schoenherr et al.   PROTEOMICS

A review on various targeted anticancer therapies

(2012) Junjie Li et al.   Targeted Oncology

Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues

(2012) Alicia Lundby et al.   Nature Communications

Contributions of the EMERALD project to assessing and improving microarray data quality

(2011) Vidar Beisvåg et al.   BIOTECHNIQUES

Authentication of African green monkey cell lines using human short tandem repeat markers

(2011) Jamie L Almeida et al.   BMC BIOTECHNOLOGY

Synthetic spike-in standards for RNA-seq experiments

(2011) L. Jiang et al.   GENOME RESEARCH

Prognostic value of HER2-positive circulating tumor cells in patients with metastatic breast cancer

(2011) Naoki Hayashi et al.   International Journal of Clinical Oncology

Breast cancer — one term, many entities?

(2011) Nicholas R. Bertos et al.   JOURNAL OF CLINICAL INVESTIGATION

Factors Influencing the Degradation of Archival Formalin-Fixed Paraffin-Embedded Tissue Sections

(2011) Ran Xie et al.   JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY

The Human Protein Atlas as a proteomic resource for biomarker discovery

(2011) F. Pontén et al.   JOURNAL OF INTERNAL MEDICINE

Protein Expression Signatures for Inhibition of Epidermal Growth Factor Receptor-mediated Signaling

(2011) Matthew V. Myers et al.   MOLECULAR & CELLULAR PROTEOMICS

A refined molecular taxonomy of breast cancer

(2011) M Guedj et al.   ONCOGENE

"The quest for biomarkers": Are we on the right technical track?

(2011) Egisto Boschetti et al.   Proteomics Clinical Applications

Setting proteins free: Progresses and achievements in proteomics of formalin-fixed, paraffin-embedded tissues

(2011) Alessandro Tanca et al.   Proteomics Clinical Applications

Antibody validation

(2010) Jennifer Bordeaux et al.   BIOTECHNIQUES

The predictive value of the 70-gene signature for adjuvant chemotherapy in early breast cancer

(2010) Michael Knauer et al.   BREAST CANCER RESEARCH AND TREATMENT

Recommendation of short tandem repeat profiling for authenticating human cell lines, stem cells, and tissues

(2010) Rita Barallon et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL

American Society of Clinical Oncology/College of American Pathologists Guideline Recommendations for Immunohistochemical Testing of Estrogen and Progesterone Receptors in Breast Cancer

(2010) M. Elizabeth H. Hammond et al.   JOURNAL OF CLINICAL ONCOLOGY

Proteomic characterization of Her2/neu-overexpressing breast cancer cells

(2010) Hexin Chen et al.   PROTEOMICS

Cell Lines as Candidate Reference Materials for Quality Control of ERBB2 Amplification and Expression Assays in Breast Cancer

(2009) Y. Xiao et al.   CLINICAL CHEMISTRY

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

Heat Stabilization of the Tissue Proteome: A New Technology for Improved Proteomics

(2009) Marcus Svensson et al.   JOURNAL OF PROTEOME RESEARCH

Repeatability and Reproducibility in Proteomic Identifications by Liquid Chromatography−Tandem Mass Spectrometry

(2009) David L. Tabb et al.   JOURNAL OF PROTEOME RESEARCH

Delay to formalin fixation effect on breast biomarkers

(2009) Thaer Khoury et al.   MODERN PATHOLOGY

Interlaboratory Study Characterizing a Yeast Performance Standard for Benchmarking LC-MS Platform Performance

(2009) Amanda G. Paulovich et al.   MOLECULAR & CELLULAR PROTEOMICS

Performance Metrics for Liquid Chromatography-Tandem Mass Spectrometry Systems in Proteomics Analyses

(2009) Paul A. Rudnick et al.   MOLECULAR & CELLULAR PROTEOMICS

Multi-site assessment of the precision and reproducibility of multiple reaction monitoring–based measurements of proteins in plasma

(2009) Terri A Addona et al.   NATURE BIOTECHNOLOGY

Molecular Profiling of Breast Cancer Cell Lines Defines Relevant Tumor Models and Provides a Resource for Cancer Gene Discovery

(2009) Jessica Kao et al.   PLoS One

Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen

(2008) Sherene Loi et al.   BMC GENOMICS

An Integrative Genomic and Proteomic Analysis of PIK3CA, PTEN, and AKT Mutations in Breast Cancer

(2008) K. Stemke-Hale et al.   CANCER RESEARCH

Current issues in ER and HER2 testing by IHC in breast cancer

(2008) Allen M Gown   MODERN PATHOLOGY

A Portrait of Tissue Phosphoprotein Stability in the Clinical Tissue Procurement Process

(2008) Virginia Espina et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative proteomics using stable isotope labeling with amino acids in cell culture

(2008) H C Harsha et al.   Nature Protocols