Array-based proteomic approaches to study signal transduction pathways: Prospects, merits and challenges

Comparison of Global versus Epidermal Growth Factor Receptor Pathway Profiling for Prediction of Lapatinib Sensitivity in Bladder Cancer

(2015) Dmytro M. Havaleshko et al.   NEOPLASIA

A critical comparison of protein microarray fabrication technologies

(2014) Valentin Romanov et al.   ANALYST

SUMOylation proteins in breast cancer

(2014) Alaa T. Alshareeda et al.   BREAST CANCER RESEARCH AND TREATMENT

Carbonic Anhydrase 9 Expression Increases with Vascular Endothelial Growth Factor–Targeted Therapy and Is Predictive of Outcome in Metastatic Clear Cell Renal Cancer

(2014) Grant D. Stewart et al.   EUROPEAN UROLOGY

Recent Advances in Microarray Technologies for Proteomics

(2013) Hongyan Sun et al.   CHEMISTRY & BIOLOGY

Posttranslational Modification and Quality Control

(2013) Xuejun Wang et al.   CIRCULATION RESEARCH

Functional Profiling of Receptor Tyrosine Kinases and Downstream Signaling in Human Chondrosarcomas Identifies Pathways for Rational Targeted Therapy

(2013) Y.-X. Zhang et al.   CLINICAL CANCER RESEARCH

Reverse-Phase Protein Array Analysis to Identify Biomarker Proteins in Human Pancreatic Cancer

(2013) Yu-Jing Huang et al.   DIGESTIVE DISEASES AND SCIENCES

Delayed Times to Tissue Fixation Result in Unpredictable Global Phosphoproteome Changes

(2013) Sibylle Gündisch et al.   JOURNAL OF PROTEOME RESEARCH

Protein Microarray Characterization of theS-Nitrosoproteome

(2013) Yun-Il Lee et al.   MOLECULAR & CELLULAR PROTEOMICS

A Method for Systematic Mapping of Protein Lysine Methylation Identifies Functions for HP1β in DNA Damage Response

(2013) Huadong Liu et al.   MOLECULAR CELL

Tumour heterogeneity in the clinic

(2013) Philippe L. Bedard et al.   NATURE

A Novel Phosphopeptide Microarray Based Interactome Map in Breast Cancer Cells Reveals Phosphoprotein-GRB2 Cell Signaling Networks

(2013) Srinivasan Krishnamoorthy et al.   PLoS One

Profiling the Dynamics of a Human Phosphorylome Reveals New Components in HGF/c-Met Signaling

(2013) Crystal L. Woodard et al.   PLoS One

Dynamic protein interaction network construction and applications

(2013) Jianxin Wang et al.   PROTEOMICS

An acetylome peptide microarray reveals specificities and deacetylation substrates for all human sirtuin isoforms

(2013) David Rauh et al.   Nature Communications

Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes

(2012) Rui Chen et al.   CELL

Histone Recognition and Large-Scale Structural Analysis of the Human Bromodomain Family

(2012) Panagis Filippakopoulos et al.   CELL

Sequential Application of Anticancer Drugs Enhances Cell Death by Rewiring Apoptotic Signaling Networks

(2012) Michael J. Lee et al.   CELL

Density Variant Glycan Microarray for Evaluating Cross-Linking of Mucin-like Glycoconjugates by Lectins

(2012) Kamil Godula et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

High-Throughput Profiling of Peptide–RNA Interactions Using Peptide Microarrays

(2012) Jaeyoung Pai et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

A Pilot Characterization of Human Lung NSCLC by Protein Pathway Activation Mapping

(2012) Angela Zupa et al.   Journal of Thoracic Oncology

Investigation of stable and transient protein-protein interactions: Past, present, and future

(2012) Armand G. Ngounou Wetie et al.   PROTEOMICS

Quantitative phosphoproteomics to characterize signaling networks

(2012) Kristoffer T.G. Rigbolt et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Using protein microarrays to study phosphorylation-mediated signal transduction

(2012) Hong Zhang et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Glycan Microarrays for Decoding the Glycome

(2011) Cory D. Rillahan et al.   Annual Review of Biochemistry

Conserved Herpesvirus Kinases Target the DNA Damage Response Pathway and TIP60 Histone Acetyltransferase to Promote Virus Replication

(2011) Renfeng Li et al.   Cell Host & Microbe

Protein microarrays and novel detection platforms

(2011) Harini Chandra et al.   Expert Review of Proteomics

Emerging nanoproteomics approaches for disease biomarker detection: A current perspective

(2011) Sandipan Ray et al.   Journal of Proteomics

Profiling the Humoral Immune Response of Acute and Chronic Q Fever by Protein Microarray

(2011) Adam Vigil et al.   MOLECULAR & CELLULAR PROTEOMICS

Personalized Oncology Through Integrative High-Throughput Sequencing: A Pilot Study

(2011) S. Roychowdhury et al.   Science Translational Medicine

Peptide Arrays Identify Isoform-Selective Substrates for Profiling Endogenous Lysine Deacetylase Activity

(2010) Zachary A. Gurard-Levin et al.   ACS Chemical Biology

Recognition and Specificity Determinants of the Human Cbx Chromodomains

(2010) Lilia Kaustov et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Differential Receptor Binding Affinities of Influenza Hemagglutinins on Glycan Arrays

(2010) Hsin-Yu Liao et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Histidine-tag-directed chromophores for tracer analyses in the analytical ultracentrifuge

(2010) Lance M. Hellman et al.   METHODS

Systems analysis of EGF receptor signaling dynamics with microwestern arrays

(2010) Mark F Ciaccio et al.   NATURE METHODS

Quantifying protein–protein interactions in high throughput using protein domain microarrays

(2010) Alexis Kaushansky et al.   Nature Protocols

Mapping mouse IL-13 binding regions using structure modeling, molecular docking, and high-density peptide microarray analysis

(2010) Satish K. Madala et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Protein–protein interaction studies on protein arrays: Effect of detection strategies on signal-to-background ratios

(2009) Robin Hurst et al.   ANALYTICAL BIOCHEMISTRY

Microarray-Based Multiplexed Scanometric Immunoassay for Protein Cancer Markers Using Gold Nanoparticle Probes

(2009) Dongwoo Kim et al.   ANALYTICAL CHEMISTRY

Nano-bio-chips for high performance multiplexed protein detection: Determinations of cancer biomarkers in serum and saliva using quantum dot bioconjugate labels

(2009) Jesse V. Jokerst et al.   BIOSENSORS & BIOELECTRONICS

Surface plasmon resonance imaging for affinity-based biosensors

(2009) Simona Scarano et al.   BIOSENSORS & BIOELECTRONICS

Profiling the Human Protein-DNA Interactome Reveals ERK2 as a Transcriptional Repressor of Interferon Signaling

(2009) Shaohui Hu et al.   CELL

Protein Acetylation Microarray Reveals that NuA4 Controls Key Metabolic Target Regulating Gluconeogenesis

(2009) Yu-yi Lin et al.   CELL

Integrative Analysis of Cyclin Protein Levels Identifies Cyclin B1 as a Classifier and Predictor of Outcomes in Breast Cancer

(2009) R. Agarwal et al.   CLINICAL CANCER RESEARCH

Androgen Receptor Levels and Association with PIK3CA Mutations and Prognosis in Breast Cancer

(2009) A. M. Gonzalez-Angulo et al.   CLINICAL CANCER RESEARCH

Glycan arrays: recent advances and future challenges

(2009) Oyindasola Oyelaran et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Revisiting the seed and soil in cancer metastasis

(2009) Martin Mendoza et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Quantitative cell signalling analysis reveals down-regulation of MAPK pathway activation in colorectal cancer

(2009) Christian Gulmann et al.   JOURNAL OF PATHOLOGY

Protein Array Identification of Substrates of the Epstein-Barr Virus Protein Kinase BGLF4

(2009) J. Zhu et al.   JOURNAL OF VIROLOGY

Effects of radiotherapy with concomitant and adjuvant temozolomide versus radiotherapy alone on survival in glioblastoma in a randomised phase III study: 5-year analysis of the EORTC-NCIC trial

(2009) Roger Stupp et al.   LANCET ONCOLOGY

Nuclear Receptor-Coregulator Interaction Profiling Identifies TRIP3 as a Novel Peroxisome Proliferator-activated Receptor γ Cofactor

(2009) Arjen Koppen et al.   MOLECULAR & CELLULAR PROTEOMICS

Global analysis of the glycoproteome in Saccharomyces cerevisiae reveals new roles for protein glycosylation in eukaryotes

(2009) Li A Kung et al.   Molecular Systems Biology

The Effect ofScutellaria Baicalensison the Signaling Network in Hepatocellular Carcinoma Cells

(2009) Fei Ye et al.   NUTRITION AND CANCER-AN INTERNATIONAL JOURNAL

A protein microarray-based analysis ofS-nitrosylation

(2009) Matthew W. Foster et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nanoparticle-based bio-barcode assay redefines "undetectable" PSA and biochemical recurrence after radical prostatectomy

(2009) C. S. Thaxton et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Development of reverse phase protein microarrays for the validation of clusterin, a mid-abundant blood biomarker

(2009) Adriana Aguilar-Mahecha et al.   Proteome Science

Cell-free synthesis-based protein microarrays and their applications

(2009) Harini Chandra et al.   PROTEOMICS

Label-free detection techniques for protein microarrays: Prospects, merits and challenges

(2009) Sandipan Ray et al.   PROTEOMICS

Dye-doped silica nanoparticle labels/protein microarray for detection of protein biomarkers

(2008) Hong Wu et al.   ANALYST

Microarray-Based Study of Carbohydrate−Protein Binding by Gold Nanoparticle Probes

(2008) Jingqing Gao et al.   ANALYTICAL CHEMISTRY

Antibody microarray analysis of directly labelled complex proteomes

(2008) Christer Wingren et al.   CURRENT OPINION IN BIOTECHNOLOGY

Network medicine

(2008) Tony Pawson et al.   FEBS LETTERS

Multiplexed Cell Signaling Analysis of Human Breast Cancer Applications for Personalized Therapy

(2008) Julia D. Wulfkuhle et al.   JOURNAL OF PROTEOME RESEARCH

Laser Capture Microdissection and Protein Microarray Analysis of Human Non-small Cell Lung Cancer

(2008) Amy J. VanMeter et al.   MOLECULAR & CELLULAR PROTEOMICS

Comprehensive genomic characterization defines human glioblastoma genes and core pathways

(2008) Roger McLendon et al.   NATURE

Nanotubes light up protein arrays

(2008) Sanjeeva Srivastava et al.   NATURE BIOTECHNOLOGY

Protein microarrays with carbon nanotubes as multicolor Raman labels

(2008) Zhuo Chen et al.   NATURE BIOTECHNOLOGY

Purification of low-abundance Arabidopsis plasma-membrane protein complexes and identification of candidate components

(2008) Yiping Qi et al.   PLANT JOURNAL

Identification of novel substrates for Cdk5 and new targets for Cdk5 inhibitors using high-density protein microarrays

(2008) Cathrin Schnack et al.   PROTEOMICS

Contact spotting of protein microarrays coupled with spike-in of normalizer protein permits time-resolved analysis of ERBB receptor signaling

(2008) Christian Löbke et al.   PROTEOMICS

Profiling humoral immune responses to P. falciparum infection with protein microarrays

(2008) Denise L. Doolan et al.   PROTEOMICS

Tracing pathway activities with kinase inhibitors and reverse phase protein arrays

(2008) Jan van Oostrum et al.   Proteomics Clinical Applications

An Integrated Genomic Analysis of Human Glioblastoma Multiforme

(2008) D. W. Parsons et al.   SCIENCE