Using SILAC and quantitative proteomics to investigate the interactions between viral and host proteomes

Mass spectrometry based proteomic studies on viruses and hosts – A review

(2011) Jie Zheng et al.   ANALYTICA CHIMICA ACTA

Characterization of the Interaction between Human Respiratory Syncytial Virus and the Cell Cycle in Continuous Cell Culture and Primary Human Airway Epithelial Cells

(2011) W. Wu et al.   JOURNAL OF VIROLOGY

Mass spectrometry-based immuno-precipitation proteomics - The user's guide

(2011) Sara ten Have et al.   PROTEOMICS

The NS1 protein of influenza a virus interacts with heat shock protein Hsp90 in human alveolar basal epithelial cells: Implication for virus-induced apoptosis

(2011) Chuanfu Zhang et al.   Virology Journal

Host factors mediating HIV-1 replication

(2011) Brian M. Friedrich et al.   VIRUS RESEARCH

Quantitative Subcellular Proteome and Secretome Profiling of Influenza A Virus-Infected Human Primary Macrophages

(2011) Niina Lietzén et al.   PLoS Pathogens

Isobaric protein and peptide quantification: perspectives and issues

(2010) Achim Treumann et al.   Expert Review of Proteomics

Quantitative Proteomics Using SILAC Coupled to LC−MS/MS Reveals Changes in the Nucleolar Proteome in Influenza A Virus-Infected Cells

(2010) Edward Emmott et al.   JOURNAL OF PROTEOME RESEARCH

Quantitative Proteomic Analyses of Influenza Virus-Infected Cultured Human Lung Cells

(2010) Kevin M. Coombs et al.   JOURNAL OF VIROLOGY

Quantitative Proteomic Analysis of A549 Cells Infected with Human Respiratory Syncytial Virus

(2010) Diane C. Munday et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative Proteomics Using Stable Isotope Labeling with Amino Acids in Cell Culture Reveals Changes in the Cytoplasmic, Nuclear, and Nucleolar Proteomes in Vero Cells Infected with the Coronavirus Infectious Bronchitis Virus

(2010) Edward Emmott et al.   MOLECULAR & CELLULAR PROTEOMICS

Defining the transcriptome and proteome in three functionally different human cell lines

(2010) Emma Lundberg et al.   Molecular Systems Biology

Identification of host factors involved in coronavirus replication by quantitative proteomics analysis

(2010) Mijke W. Vogels et al.   PROTEOMICS

Quantitative proteomic analysis of A549 cells infected with human respiratory syncytial virus subgroup B using SILAC coupled to LC-MS/MS

(2010) Diane C. Munday et al.   PROTEOMICS

Elucidation of the avian nucleolar proteome by quantitative proteomics using SILAC and changes in cells infected with the coronavirus infectious bronchitis virus

(2010) Edward Emmott et al.   PROTEOMICS

Gene expression profiling of Pseudorabies virus (PrV) infected bovine cells by combination of transcript analysis and quantitative proteomic techniques

(2010) Martin Skiba et al.   VETERINARY MICROBIOLOGY

Modulation of host cell responses and evasion strategies for porcine reproductive and respiratory syndrome virus

(2010) Dongwan Yoo et al.   VIRUS RESEARCH

StatQuant: a post-quantification analysis toolbox for improving quantitative mass spectrometry

(2009) Bas van Breukelen et al.   BIOINFORMATICS

Influenza A Virus NS1 Targets the Ubiquitin Ligase TRIM25 to Evade Recognition by the Host Viral RNA Sensor RIG-I

(2009) Michaela Ulrike Gack et al.   Cell Host & Microbe

Nucleolar targeting: the hub of the matter

(2009) Edward Emmott et al.   EMBO REPORTS

Bunyamwera Orthobunyavirus S-Segment Untranslated Regions Mediate Poly(A) Tail-Independent Translation

(2009) G. Blakqori et al.   JOURNAL OF VIROLOGY

Establishment of a Protein Frequency Library and Its Application in the Reliable Identification of Specific Protein Interaction Partners

(2009) Séverine Boulon et al.   MOLECULAR & CELLULAR PROTEOMICS

Proteomics Analysis of the Nucleolus in Adenovirus-infected Cells

(2009) Yun W. Lam et al.   MOLECULAR & CELLULAR PROTEOMICS

SILAC Mouse for Quantitative Proteomics Uncovers Kindlin-3 as an Essential Factor for Red Blood Cell Function

(2008) Marcus Krüger et al.   CELL

Identifying specific protein interaction partners using quantitative mass spectrometry and bead proteomes

(2008) Laura Trinkle-Mulcahy et al.   JOURNAL OF CELL BIOLOGY

Absolute SILAC for Accurate Quantitation of Proteins in Complex Mixtures Down to the Attomole Level

(2008) Stefan Hanke et al.   JOURNAL OF PROTEOME RESEARCH

Temporal Profiling of the Adipocyte Proteome during Differentiation Using a Five-Plex SILAC Based Strategy

(2008) Henrik Molina et al.   JOURNAL OF PROTEOME RESEARCH