Exploring alternate states and oligomerization preferences of coiled-coils byde novostructure modeling

LOGICOIL—multi-state prediction of coiled-coil oligomeric state

(2012) Thomas L. Vincent et al.   BIOINFORMATICS

MMPBSA.py: An Efficient Program for End-State Free Energy Calculations

(2012) Bill R. Miller et al.   Journal of Chemical Theory and Computation

Modeling Symmetric Macromolecular Structures in Rosetta3

(2011) Frank DiMaio et al.   PLoS One

Computational analysis of residue contributions to coiled-coil topology

(2011) Jorge Ramos et al.   PROTEIN SCIENCE

Role of conformational sampling in computing mutation-induced changes in protein structure and stability

(2010) Elizabeth H. Kellogg et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Simultaneous prediction of protein folding and docking at high resolution

(2009) Rhiju Das et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural specificity in coiled-coil interactions

(2008) G GRIGORYAN et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

CC+: a relational database of coiled-coil structures

(2008) O. D. Testa et al.   NUCLEIC ACIDS RESEARCH

Predicting helix orientation for coiled-coil dimers

(2008) James R. Apgar et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Core Residue Replacements Cause Coiled-Coil Orientation Switchingin Vitroandin Vivo:  Structure−Function Correlations for Osmosensory Transporter ProP†

(2007) Yonit Tsatskis et al.   BIOCHEMISTRY