Vivaldi: Visualization and validation of biomacromolecular NMR structures from the PDB

CING: an integrated residue-based structure validation program suite

(2012) Jurgen F. Doreleijers et al.   JOURNAL OF BIOMOLECULAR NMR

The Protein Data Bank in Europe (PDBe): bringing structure to biology

(2011) Sameer Velankar et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

SHIFTX2: significantly improved protein chemical shift prediction

(2011) Beomsoo Han et al.   JOURNAL OF BIOMOLECULAR NMR

Protein Data Bank Japan (PDBj): maintaining a structural data archive and resource description framework format

(2011) A. R. Kinjo et al.   NUCLEIC ACIDS RESEARCH

PDBe: Protein Data Bank in Europe

(2011) S. Velankar et al.   NUCLEIC ACIDS RESEARCH

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

NRG-CING: integrated validation reports of remediated experimental biomolecular NMR data and coordinates in wwPDB

(2011) J. F. Doreleijers et al.   NUCLEIC ACIDS RESEARCH

A New Generation of Crystallographic Validation Tools for the Protein Data Bank

(2011) Randy J. Read et al.   STRUCTURE

A novel strategy for NMR resonance assignment and protein structure determination

(2010) Alexander Lemak et al.   JOURNAL OF BIOMOLECULAR NMR

SPARTA+: a modest improvement in empirical NMR chemical shift prediction by means of an artificial neural network

(2010) Yang Shen et al.   JOURNAL OF BIOMOLECULAR NMR

Extending CATH: increasing coverage of the protein structure universe and linking structure with function

(2010) A. L. Cuff et al.   NUCLEIC ACIDS RESEARCH

PROSESS: a protein structure evaluation suite and server

(2010) M. Berjanskii et al.   NUCLEIC ACIDS RESEARCH

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries

(2009) Jurgen F. Doreleijers et al.   JOURNAL OF BIOMOLECULAR NMR

Empirical correlation between protein backbone 15N and 13C secondary chemical shifts and its application to nitrogen chemical shift re-referencing

(2009) Liya Wang et al.   JOURNAL OF BIOMOLECULAR NMR

TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

(2009) Yang Shen et al.   JOURNAL OF BIOMOLECULAR NMR

DANGLE: A Bayesian inferential method for predicting protein backbone dihedral angles and secondary structure

(2009) Ming-Sin Cheung et al.   JOURNAL OF MAGNETIC RESONANCE

Fast and Accurate Predictions of Protein NMR Chemical Shifts from Interatomic Distances

(2009) Kai J. Kohlhoff et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Quantum-mechanics-derived 13C  chemical shift server (CheShift) for protein structure validation

(2009) J. A. Vila et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

OLDERADO: On-line database of ensemble representatives and domains

(2009) Lawrence A. Kelley et al.   PROTEIN SCIENCE