Smooth statistical torsion angle potential derived from a large conformational database via adaptive kernel density estimation improves the quality of NMR protein structures

Restraints on backbone conformations in solid state NMR studies of uniformly labeled proteins from quantitative amide 15N–15N and carbonyl 13C–13C dipolar recoupling data

(2012) Kan-Nian Hu et al.   JOURNAL OF MAGNETIC RESONANCE

Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy

(2012) Ishita Sengupta et al.   Nature Chemistry

NMR Structures of ApoL. caseiDihydrofolate Reductase and Its Complexes with Trimethoprim and NADPH: Contributions to Positive Cooperative Binding from Ligand-Induced Refolding, Conformational Changes, and Interligand Hydrophobic Interactions

(2011) James Feeney et al.   BIOCHEMISTRY

Mayavi: 3D Visualization of Scientific Data

(2011) Prabhu Ramachandran et al.   COMPUTING IN SCIENCE & ENGINEERING

High-resolution membrane protein structure by joint calculations with solid-state NMR and X-ray experimental data

(2011) Ming Tang et al.   JOURNAL OF BIOMOLECULAR NMR

AssignFit: A program for simultaneous assignment and structure refinement from solid-state NMR spectra

(2011) Ye Tian et al.   JOURNAL OF MAGNETIC RESONANCE

STAP Refinement of the NMR database: a database of 2405 refined solution NMR structures

(2011) J. S. Yang et al.   NUCLEIC ACIDS RESEARCH

Structural topology of phospholamban pentamer in lipid bilayers by a hybrid solution and solid-state NMR method

(2011) R. Verardi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Smoothed Backbone-Dependent Rotamer Library for Proteins Derived from Adaptive Kernel Density Estimates and Regressions

(2011) Maxim V. Shapovalov et al.   STRUCTURE

A New Generation of Crystallographic Validation Tools for the Protein Data Bank

(2011) Randy J. Read et al.   STRUCTURE

Solution Structure of the 128 kDa Enzyme I Dimer fromEscherichia coliand Its 146 kDa Complex with HPr Using Residual Dipolar Couplings and Small- and Wide-Angle X-ray Scattering

(2010) Charles D. Schwieters et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Combined Use of Residual Dipolar Couplings and Solution X-ray Scattering To Rapidly Probe Rigid-Body Conformational Transitions in a Non-phosphorylatable Active-Site Mutant of the 128 kDa Enzyme I Dimer

(2010) Yuki Takayama et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases

(2010) John Kuszewski et al.   PROTEIN SCIENCE

The Structure of theStaphylococcus aureusSortase-Substrate Complex Reveals How the Universally Conserved LPXTG Sorting Signal Is Recognized

(2009) Nuttee Suree et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A refinement protocol to determine structure, topology, and depth of insertion of membrane proteins using hybrid solution and solid-state NMR restraints

(2009) Lei Shi et al.   JOURNAL OF BIOMOLECULAR NMR

Protein Structure Refinement Using13Cα Chemical Shift Tensors

(2009) Benjamin J. Wylie et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structure and topology of monomeric phospholamban in lipid membranes determined by a hybrid solution and solid-state NMR approach

(2009) N. J. Traaseth et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differentiable, multi-dimensional, knowledge-based energy terms for torsion angle probabilities and propensities

(2008) El-Ad David Amir et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS