Counting peptide-water hydrogen bonds in unfolded proteins

Hydrogen Bonding Progressively Strengthens upon Transfer of the Protein Urea-Denatured State to Water and Protecting Osmolytes

(2010) Luis Marcelo F. Holthauzen et al.   BIOCHEMISTRY

Evidence for Initial Non-specific Polypeptide Chain Collapse During the Refolding of the SH3 Domain of PI3 Kinase

(2010) Amrita Dasgupta et al.   JOURNAL OF MOLECULAR BIOLOGY

Current Status of the AMOEBA Polarizable Force Field

(2010) Jay W. Ponder et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Redrawing the Ramachandran plot after inclusion of hydrogen-bonding constraints

(2010) L. L. Porter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Urea denatured state ensembles contain extensive secondary structure that is increased in hydrophobic proteins

(2010) C. Nick Pace et al.   PROTEIN SCIENCE

Physical-chemical determinants of coil conformations in globular proteins

(2010) Lauren L. Perskie et al.   PROTEIN SCIENCE

The Unfolded State of the C-Terminal Domain of the Ribosomal Protein L9 Contains Both Native and Non-Native Structure

(2009) Bing Shan et al.   BIOCHEMISTRY

Protein Folding, Protein Collapse, and Tanford’s Transfer Model: Lessons from Single-Molecule FRET

(2009) Guy Ziv et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structure and Energetics of the Hydrogen-Bonded Backbone in Protein Folding

(2008) D. Wayne Bolen et al.   Annual Review of Biochemistry

Ramachandran Revisited. DFT Energy Surfaces of Diastereomeric Trialanine Peptides in the Gas Phase and Aqueous Solution

(2008) Midas (I-Hsien) Tsai et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Role of Backbone−Solvent Interactions in Determining Conformational Equilibria of Intrinsically Disordered Proteins

(2008) Hoang T. Tran et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Assessing the solvent-dependent surface area of unfolded proteins using an ensemble model

(2008) H. Gong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structures, basins, and energies: A deconstruction of the Protein Coil Library

(2008) Lauren L. Perskie et al.   PROTEIN SCIENCE

Tryptophan Fluorescence Reveals the Presence of Long-Range Interactions in the Denatured State of Ribonuclease Sa

(2007) Roy W. Alston et al.   BIOPHYSICAL JOURNAL