4.6 Article

NMR solution structures of actin depolymerizing factor homology domains

Journal

PROTEIN SCIENCE
Volume 18, Issue 11, Pages 2384-2392

Publisher

WILEY
DOI: 10.1002/pro.248

Keywords

actin-depolymerizing factor homology domain; G-actin binding; F-actin binding; structure stabilization

Funding

  1. RIKEN Structural Genomics/Proteomics Initiative (RSGI)
  2. The National Project on Protein Structural and Functional Analyses
  3. Ministry of Education, Culture, Sports, Science, and Technology of Japan

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Actin is one of the most conserved proteins in nature. Its assembly and disassembly are regulated by many proteins, including the family of actin-depolymerizing factor homology (ADF-H) domains. ADF-H domains can be divided into five classes: ADF/cofilin, glia maturation factor (GMF), coactosin, twinfilin, and Abp1/drebrin. The best-characterized class is ADF/cofilin. The other four classes have drawn much less attention and very few structures have been reported. This study presents the solution NMR structure of the ADF-H domain of human HIP-55-drebrin-like protein, the first published structure of a drebrin-like domain (mammalian), and the first published structure of GMF beta (mouse). We also determined the structures of mouse GMF gamma, the mouse coactosin-like domain and the C-terminal ADF-H domain of mouse twinfilin 1. Although the overall fold of the five domains is similar, some significant differences provide valuable insights into filamentous actin (F-actin) and globular actin (G-actin) binding, including the identification of binding residues on the long central helix. This long helix is stabilized by three or four residues. Notably, the F-actin binding sites of mouse GMF beta and GMF gamma contain two additional beta-strands not seen in other ADF-H structures. The G-actin binding site of the ADF-H domain of human HIP-55-drebrin-like protein is absent and distorted in mouse GMF beta and GMF gamma.

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