Reducing phylogenetic bias in correlated mutation analysis

NNcon: improved protein contact map prediction using 2D-recursive neural networks

(2009) A. N. Tegge et al.   NUCLEIC ACIDS RESEARCH

Peptides modulating conformational changes in secreted chaperones: From in silico design to preclinical proof of concept

(2009) Y. Kliger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8

(2009) Iakes Ezkurdia et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Critical assessment of methods of protein structure prediction-Round VIII

(2009) John Moult et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Protein Dynamism and Evolvability

(2009) N. Tokuriki et al.   SCIENCE

Analysing the origin of long-range interactions in proteins using lattice models

(2009) Orly Noivirt-Brik et al.   BMC STRUCTURAL BIOLOGY

Using inferred residue contacts to distinguish between correct and incorrect protein models

(2008) Christopher S. Miller et al.   BIOINFORMATICS

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

Reconstruction of 3D Structures From Protein Contact Maps

(2008) M. Vassura et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Optimal data collection for correlated mutation analysis

(2008) Haim Ashkenazy et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

BIOCHEMISTRY: How Do Proteins Interact?

(2008) D. D. Boehr et al.   SCIENCE

Recognition Dynamics Up to Microseconds Revealed from an RDC-Derived Ubiquitin Ensemble in Solution

(2008) O. F. Lange et al.   SCIENCE

Contact prediction in protein modeling: Scoring, folding and refinement of coarse-grained models

(2008) Dorota Latek et al.   BMC STRUCTURAL BIOLOGY