Methylome sequencing in triple-negative breast cancer reveals distinct methylation clusters with prognostic value

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The CpG Island Methylator Phenotype: What's in a Name?

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Interplay between the Cancer Genome and Epigenome

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Coordinate H3K9 and DNA methylation silencing of ZNFs in toxicant-induced malignant transformation

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Epigenome-wide Association Study of Breast Cancer Using Prospectively Collected Sister Study Samples

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BCL-2 Hypermethylation Is a Potential Biomarker of Sensitivity to Antimitotic Chemotherapy in Endocrine-Resistant Breast Cancer

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WT1 CpG islands methylation in human lung cancer: A pilot study

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CST6 promoter methylation in circulating cell-free DNA of breast cancer patients

(2012) Maria Chimonidou et al.   CLINICAL BIOCHEMISTRY

BRCA1epigenetic inactivation predicts sensitivity to platinum-based chemotherapy in breast and ovarian cancer

(2012) Olafur A. Stefansson et al.   Epigenetics

HOX gene methylation status analysis in patients with hereditary breast cancer

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Comprehensive molecular portraits of human breast tumours

(2012) Daniel C. Koboldt et al.   NATURE

Molecular Characteristics and Metastasis Predictor Genes of Triple-Negative Breast Cancer: A Clinical Study of Triple-Negative Breast Carcinomas

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Methylomic Analysis Identifies Frequent DNA Methylation of Zinc Finger Protein 582 (ZNF582) in Cervical Neoplasms

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Diagnosis of Bladder Cancer Recurrence Based on Urinary Levels of EOMES, HOXA9, POU4F2, TWIST1, VIM, and ZNF154 Hypermethylation

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DNA methylation signatures for breast cancer classification and prognosis

(2012) Moshe Szyf   Genome Medicine

Hypermethylation of a Cluster of Krüppel-Type Zinc Finger Protein Genes on Chromosome 19q13 in Oropharyngeal Squamous Cell Carcinoma

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Prognostic significance of gene-specific promoter hypermethylation in breast cancer patients

(2011) Yoon Hee Cho et al.   BREAST CANCER RESEARCH AND TREATMENT

Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence

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Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias

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Breast Cancer Adjuvant Therapy: Time to Consider Its Time-Dependent Effects

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Gene expression profiling in breast cancer: classification, prognostication, and prediction

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Mapping and analysis of chromatin state dynamics in nine human cell types

(2011) Jason Ernst et al.   NATURE

Molecular Stratification of Triple-Negative Breast Cancers

(2011) C. M. Perou   ONCOLOGIST

Transcriptionally repressed genes become aberrantly methylated and distinguish tumors of different lineages in breast cancer

(2011) D. Sproul et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Breast Cancer Methylomes Establish an Epigenomic Foundation for Metastasis

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Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis

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KRAB Zinc Finger Protein ZNF382 Is a Proapoptotic Tumor Suppressor That Represses Multiple Oncogenes and Is Commonly Silenced in Multiple Carcinomas

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Evaluation of affinity-based genome-wide DNA methylation data: Effects of CpG density, amplification bias, and copy number variation

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Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

HOXB13, a Target of DNMT3B, Is Methylated at an Upstream CpG Island, and Functions as a Tumor Suppressor in Primary Colorectal Tumors

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Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation

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Subtyping of Breast Cancer by Immunohistochemistry to Investigate a Relationship between Subtype and Short and Long Term Survival: A Collaborative Analysis of Data for 10,159 Cases from 12 Studies

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

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Linking DNA methylation and histone modification: patterns and paradigms

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MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome

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Epigenetic repression of the estrogen-regulated Homeobox B13 gene in breast cancer

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