Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution

Allosteric Tertiary Interactions Preorganize the c-di-GMP Riboswitch and Accelerate Ligand Binding

(2012) Sharla Wood et al.   ACS Chemical Biology

Molecular recognition and function of riboswitches

(2012) Alexander Serganov et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Fingerprinting Noncanonical and Tertiary RNA Structures by Differential SHAPE Reactivity

(2012) Kady-Ann Steen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Folding energy landscape of the thiamine pyrophosphate riboswitch aptamer

(2012) P. C. Anthony et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch

(2012) G. A. Perdrizet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Dynamic Nature of RNA as Key to Understanding Riboswitch Mechanisms

(2011) Andrea Haller et al.   ACCOUNTS OF CHEMICAL RESEARCH

Riboswitches: Discovery of Drugs That Target Bacterial Gene-Regulatory RNAs

(2011) Katherine E. Deigan et al.   ACCOUNTS OF CHEMICAL RESEARCH

kinITC: A New Method for Obtaining Joint Thermodynamic and Kinetic Data by Isothermal Titration Calorimetry

(2011) Dominique Burnouf et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Prospects for Riboswitch Discovery and Analysis

(2011) Ronald R. Breaker   MOLECULAR CELL

Conformational capture of the SAM-II riboswitch

(2011) Andrea Haller et al.   Nature Chemical Biology

Riboswitch structure in the ligand-free state

(2011) Joseph A. Liberman et al.   Wiley Interdisciplinary Reviews-RNA

Highly Modular Structure and Ligand Binding by Conformational Capture in a Minimalistic Riboswitch

(2010) Elke Duchardt-Ferner et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Multivector Fluorescence Analysis of thexptGuanine Riboswitch Aptamer Domain and the Conformational Role of Guanine

(2010) Michael D. Brenner et al.   BIOCHEMISTRY

Selective 2′-Hydroxyl Acylation Analyzed by Protection from Exoribonuclease

(2010) Kady-Ann Steen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Multiple native states reveal persistent ruggedness of an RNA folding landscape

(2010) Sergey V. Solomatin et al.   NATURE

Determination of riboswitch structures: Light at the end of the tunnel?

(2010) Alexander Serganov   RNA Biology

Riboswitch function: Flipping the switch or tuning the dimmer?

(2010) Nathan J. Baird et al.   RNA Biology

Idiosyncratically tuned switching behavior of riboswitch aptamer domains revealed by comparative small-angle X-ray scattering analysis

(2010) N. J. Baird et al.   RNA

Riboswitches: Structures and Mechanisms

(2010) A. D. Garst et al.   Cold Spring Harbor Perspectives in Biology

A switch in time: Detailing the life of a riboswitch

(2009) Andrew D. Garst et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Mitigating Unwanted Photophysical Processes for Improved Single-Molecule Fluorescence Imaging

(2009) Richa Dave et al.   BIOPHYSICAL JOURNAL

The Ligand-Free State of the TPP Riboswitch: A Partially Folded RNA Structure

(2009) Mona Ali et al.   JOURNAL OF MOLECULAR BIOLOGY

The role of dynamic conformational ensembles in biomolecular recognition

(2009) David D Boehr et al.   Nature Chemical Biology

Thermodynamic analysis of ligand binding and ligand binding-induced tertiary structure formation by the thiamine pyrophosphate riboswitch

(2009) N. Kulshina et al.   RNA

Riboswitches: Ancient and Promising Genetic Regulators

(2008) Simon Blouin et al.   CHEMBIOCHEM

RNA dynamics: it is about time

(2008) Hashim M Al-Hashimi et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

A practical guide to single-molecule FRET

(2008) Rahul Roy et al.   NATURE METHODS

The preparation of site-specifically modified riboswitch domains as an example for enzymatic ligation of chemically synthesized RNA fragments

(2008) Kathrin Lang et al.   Nature Protocols